Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq23 408 4e-109 seq33 131 2e-25 seq59 122 9e-23 seq60 111 2e-19 seq27 111 2e-19 >seq23 Length=193243 Score = 408 bits (452), Expect = 4e-109 Identities = 600/839 (72%), Gaps = 15/839 (2%) Strand=Plus/Plus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 ||||| || ||| | ||||| || | |||| || || ||| |||||||| ||||| Sbjct 41299 CGCCGCTTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCT 41358 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719 ||||| ||||||||||||| |||||||| || ||||| |||||| | ||||||||| Sbjct 41359 GAGGCCTCGTTCTGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGAC 41418 Query 116720 ---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCC 116776 ||| |||||||||||||||| || || | | ||| || || || |||||||| Sbjct 41419 AACCGCATGAACGACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCG 41478 Query 116777 AGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCC 116836 ||||| || || |||||||| ||| | ||||||||| | || ||||||||||| Sbjct 41479 TCGGACGGTATTGTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGCG 41538 Query 116837 GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 ||||| || ||||||||||| || ||||| ||||||||| | |||||||| | || Sbjct 41539 GAGGCTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTAC 41598 Query 116897 TCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGA---AGCTCCGTTTGTTGAAC 116953 ||| ||||||||||||||| | ||| ||| | || || || |||| ||| Sbjct 41599 TCGCTGCTCATCGACACGTACATCCGCGACACGGCGCAGCGCGAGTACC---TGTTCAAC 41655 Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 || |||||||| || || || || |||||||||||||||| || |||||||| || Sbjct 41656 GCTATCGAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCG 41715 Query 117014 GGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072 | || || | ||| | ||| |||||||| ||||| || || ||||| |||||| |||| Sbjct 41716 GACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTT 41774 Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 ||| |||||| || || | || || ||||| ||||| || || |||||||| || || Sbjct 41775 CTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCT 41834 Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192 | | ||| |||||||| || || | |||||||||||||| ||||||||| || || Sbjct 41835 GTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTT 41894 Query 117193 GCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||||||| || || | |||| || | | | | || |||| ||| | |||| Sbjct 41895 GCTGTTCAGTCACCTGAAGAAGCGCTCGCACCCTGACACG-GTCAACCGCATCATTACCG 41953 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGAC 117311 | || ||| | |||||| || ||| | || || || ||||| ||| || | || Sbjct 41954 AGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCA 42013 Query 117312 TCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAG 117370 | || ||| | |||| || ||||| ||||| || |||||| | |||||| ||| Sbjct 42014 TGAA-TGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCT 42072 Query 117371 CTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | | | | ||||||||| || || | || || | ||||||||| | |||||| Sbjct 42073 CTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTC 42131 >seq33 Length=1115382 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| || || || | Sbjct 831487 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 831428 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 831427 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 831368 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| || || |||||||| |||| |||||||||| |||||||||| Sbjct 831367 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 831308 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| || || || ||| Sbjct 831307 ATCCAGAAGGAGAGCACTCTTCACCTGGTG 831278 >seq59 Length=643831 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || ||||| || || || |||||| | || || || | || Sbjct 401242 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401301 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 401302 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401361 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 401362 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401421 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| ||||| || | || || Sbjct 401422 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGG 401468 >seq60 Length=383220 Score = 111 bits (122), Expect = 2e-19 Identities = 125/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 40735 GACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGG 40793 || |||||| || | |||| | || |||| |||||| || || | ||||| ||||| Sbjct 383212 GAAGTCGAATCCTCGGACACGATTGATAACG-TCAAGGCTAAGATCCAGGACAAGGAGGG 383154 Query 40794 CATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCAC 40853 ||| || ||||||| || || || || | ||| || || |||||||| || | ||||| Sbjct 383153 CATTCCACCGGACCAACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCAC 383094 Query 40854 CCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | |||||||||||||||||||||| ||||||||| || || Sbjct 383093 TCTGAGCGACTACAACATCCAGAAGGAGAGCACGCTGCACCTTGT 383049 >seq27 Length=46380 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || |||||||| ||||| || |||||| | || || || | | Sbjct 325 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 266 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| || || || || ||||||| Sbjct 265 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 206 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| || || || ||| |||| || | |||||| || | |||||||||| Sbjct 205 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 146 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||| || || || || Sbjct 145 ATCCAGAAGGAGAGCACTCTTCACCTGGT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218807145360