Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq33 123 2e-23 seq59 116 3e-21 seq23 102 7e-17 seq60 93.3 4e-14 >seq33 Length=1115382 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||| || || |||||||| ||||| | ||||| ||||| Sbjct 831278 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 831337 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | ||||||||||| || || ||||| || ||||||||||| Sbjct 831338 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 831397 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||||| | ||| ||||||| || | ||| || Sbjct 831398 GATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTT 831457 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 ||| |||||||| || || || || |||||||| Sbjct 831458 GCCAGTCAGAGTCTTGACGAAGATTTGCATGGC 831490 >seq59 Length=643831 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || ||||| || || |||||||| ||||||| ||||| ||| Sbjct 401454 CAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 401395 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| || |||||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 401394 CTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 401335 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||| | ||| | ||| Sbjct 401334 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 401275 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || ||||| || || || || || | ||||| ||| Sbjct 401274 CTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCT 401238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 |||||||| ||||| || || || | || ||| ||||| ||||| ||||| || || Sbjct 499089 TCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAG 499148 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAAC 118663 || |||||||| ||||| ||||| || |||||||||||| ||| ||| ||| || Sbjct 499149 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499204 >seq23 Length=193243 Score = 102 bits (112), Expect = 7e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134394 ATCAACGCGGACTCGTGTAGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTT 134453 |||||||| |||| | || || | ||||||||| || | ||||||||| |||| Sbjct 26927 ATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCAC 26986 Query 134454 TGCAGGAAACACGAACACATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTC 134513 ||||| ||||| |||| || | |||||||||| ||||| ||||| Sbjct 26987 ACAAGGAAGCACGACGACATCTGCGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAG 27046 Query 134514 GCGTGCGTAAAGG--TGCCCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGT 134571 || |||||||| | | | | ||| || | | || || ||||| |||||| |||| Sbjct 27047 GCATGCGTAAACGCCTTCTCGGAC--ATGTAGTTGTACGTCTCAATAGCGCTCTCCACGT 27104 Query 134572 CGTCGCCGTGAATGGCCAGAGCGACGCGCATGAGCATGTGTTGGGGTCTCTC 134623 | |||||||||||| | | ||| || |||||||||||||| || |||| ||| Sbjct 27105 CCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTC 27156 >seq60 Length=383220 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||||| |||||| |||||| ||||| || |||||| | Sbjct 383066 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 383125 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||||||| || || || || |||||||||||||| Sbjct 383126 AATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 383164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830077474212