Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq23 450 1e-121 seq33 116 3e-21 seq27 104 2e-17 seq59 102 7e-17 >seq23 Length=193243 Score = 450 bits (498), Expect = 1e-121 Identities = 1240/1878 (66%), Gaps = 50/1878 (3%) Strand=Plus/Plus Query 22111 CACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTT 22170 ||| || ||||| || || | || || || ||||| || || || |||| ||||| Sbjct 25384 CACCGTGAACTGGATCGCATCCGCAGCAGGACGCGTGCGCAGGTAGTAGCTGCCGGTCTT 25443 Query 22171 CAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAGTC 22230 |||||| ||||||| |||| || || |||||||| | | || | ||||| || Sbjct 25444 GAGACCCTTCTTCCAGCCGTAGAAGTGCATCGACGTAAGCTGGCCGAACGTCGGCGAGCT 25503 Query 22231 CATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATT 22290 || || | || || ||| ||||| ||| ||||| || || || || | ||| | Sbjct 25504 CAGGTGGATGTTCAAGCTCTGGCTCTGGCAGATGAACGCACCACGGTCCGCCGACATGTC 25563 Query 22291 TATCAATGTACGCATC-GAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347 || |||| || | || | | || ||||| |||||||||||||| | |||| | Sbjct 25564 GAT-AATG-AC-CTTCTGGCTAATCTCCCACACGGTCTTGTACAGCGCCTTGATGTGGTC 25620 Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGT 22407 || || || | |||| || ||| | ||||| | || ||||| Sbjct 25621 GGGAATGCCAGGGACGTTTTGGATCGAGCCGCCGTGCGCAATGATGCGCTGCTTCATCGT 25680 Query 22408 ATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAA 22467 |||||||||| ||| | || || || | ||| ||||||| ||||| || Sbjct 25681 CTCGTTCCACAGACCCAGCTCGACCAGCTCACGCAGCAGCCACGGGTTCACGACTTGGAA 25740 Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527 |||||||| | || ||||| |||||||||| ||| |||| || || | || || Sbjct 25741 CTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGTT 25800 Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587 || || ||||| ||||| || ||||||||||||| | || |||||||| | Sbjct 25801 AAAGCCAAGGATCTGGCTCGTCGACGCAGTCGGCATCGGCGAAAGGAGAAGCGAGTTGCG 25860 Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647 |||||||||||||| ||| || ||||||| || |||||||||||| |||| |||||| Sbjct 25861 CAAGCCGTGCTTTGCAATCTTGGCCTTGAGCTCCGTCCAGTCCCACAGGTCGGTCGGCGT 25920 Query 22648 CACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGGCTGCCTTCGTAC 22705 | |||| |||||| ||||| |||| | || | |||| || |||||||| |||||| Sbjct 25921 C---TTGTTCCACATGTCGTACTGCAGAATACCCTGCGAG--GCAGGGCTGCCCTCGTAC 25975 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC-CTCCAACGCGCCGTAATA 22764 || ||||||| || || || || || || || | || ||||| ||| ||| || Sbjct 25976 GTCTCGTACGTGCCGTACTCGGCCGCCAGCTCACA-CGAGCGCTCCAGCGCAGCGTGGTA 26034 Query 22765 TATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTACGGCATAC 22823 || ||||| ||||| | |||| | | | || || | ||| ||| | || | Sbjct 26035 GATCGTCTCAAAGATCTGGATGTTGAGCT-GACGCGCCTCCTGGCTGTCGAAGGGGTAGC 26093 Query 22824 GCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCA 22883 ||| |||| |||||| ||||||| ||||| || || ||||||||||| || | || Sbjct 26094 CCATAATCATGAACGCATCCGCCAGGCCCTGGACACCGATACCGATCGGGCGATGGCGCA 26153 Query 22884 GATTCGACACTTTTGCC---TCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCA 22940 ||||| |||| ||| | |||||| | || || || | | ||||| Sbjct 26154 TGTTCGAGCGGCGTGCCGACTCG---ACAGGATAGTAGTTGATGTCAATAATGCGGTTCA 26210 Query 22941 AGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAA-------ACG 22993 ||| || ||| | |||| | | |||| ||| | | Sbjct 26211 GGTTCTTGCACACGACCTTCGCCACGTCGTGCAGGCGCTGGAAGTTGTAGCGCTTCGAGG 26270 Query 22994 CCCGATTGTAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCT 23051 | | | || | || ||| | || || |||||||| || ||||| |||||| || Sbjct 26271 CACCAGTGCCCTCAATGAACGTCGGGAGCGCAATCGAGGCCAGGTTGCACACGGCCGTCT 26330 Query 23052 CGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCA 23111 | || || |||||| | ||| || || || || || | ||| |||||||| | Sbjct 26331 CATCGGGCGAGCAGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCGA 26390 Query 23112 AATTGCTCTGGTTGCTTTTTCGATT-GCACGAATCCTTGTAGAGCATGTACGGCGTGCCC 23170 || | |||||||| || || || ||| | ||||||||| || ||| |||| ||||| Sbjct 26391 GGTTCTTTTGGTTGCTCTTGCGGTTCGCA-GCATCCTTGTACAGAATGAACGGATTGCCC 26449 Query 23171 GTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC---ACGTCGC 23227 ||||| ||| | ||||| || || ||||| |||| || | || ||| || Sbjct 26450 GTCTCCGTCTGTGCCTCGAGAATAGCGTACCACAGCTTCTGCGCCTTGACCTTACGACGG 26509 Query 23228 ACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAG 23287 | | | ||||| ||||||||||| ||||| | ||||| || | ||||| ||| Sbjct 26510 A---AACGACCTTCGCTCTCGTACTTTTCGTACAGCTTCTCAAACTCCTCGCCGTAGCAG 26566 Query 23288 TCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACG 23347 || |||||||| || | | | || ||||| || |||| || | || || Sbjct 26567 TCCGCCAGGCCAGGGCACTCCGAAGGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACA 26626 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 || ||||||| ||||| || | ||| || || ||| | || || || ||||| || Sbjct 26627 CGCTTCATAAACAGATCTGGCACCCACAGCGCCAGGAAAATGTCACGCGCACGCACTTCG 26686 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || |||||| |||||| || || | ||| || ||||| |||| ||||||||||| Sbjct 26687 TCCTTGCCGTGGTTCTTGCGCAGGTCGATAAACTCAAACACATCCGGGTGCCACGGCTCC 26746 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 ||||| | |||||||| || || | ||| ||||||||||| || ||||| || |||||| Sbjct 26747 AGGTAGATCGCAAACGCACCAGGGCGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTG 26806 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587 |||||| |||| | ||||| ||||| | ||||||| | | ||| ||| | | | Sbjct 26807 TTGTTGAACACACGCAGCATTGGCACAATACCGTTGCTCACACCGTTCGTGCCGGAAATA 26866 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 ||| || | || || | | ||| | || | ||| || || || ||| || Sbjct 26867 TACGAGCCAGTGGCGCGGATGCAGTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTG 26926 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 |||| ||| || | || || |||||||| |||||||| || ||| || || | Sbjct 26927 ATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCAC 26986 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 || | ||| ||||| ||||| |||| || |||||| | || |||||| ||||| | Sbjct 26987 ACAAGGAAGCACGACGACATCTGCGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAG 27046 Query 23768 GCGTGCGTAAA-GTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825 || |||||||| | | | | ||||| ||| |||||||| || || ||| || | || Sbjct 27047 GCATGCGTAAACGCCTTC-TCGGACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGT 27104 Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCG 23882 |||| ||||| || || | || || ||||| | ||||| || |||| || ||||| Sbjct 27105 CCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCT 27164 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | |||||| || | || || || |||| || ||| || || ||||| ||| | Sbjct 27165 T---GCCGTTGATGCGCAGAAGGTACGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGT 27221 Query 23943 AGTTAAAGTCACGATCGT 23960 ||| ||||| || |||| Sbjct 27222 AGTGGAAGTCGCGCTCGT 27239 Score = 257 bits (284), Expect = 1e-63 Identities = 583/866 (67%), Gaps = 27/866 (3%) Strand=Plus/Plus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 ||||| |||| ||||| || | || || ||| |||||||| ||||| || || Sbjct 41305 TTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCC 41364 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 ||||| ||||||| || || || || ||||| ||||| || ||| ||||| || | Sbjct 41365 TCGTTCTGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGACAACCGC 41424 Query 57660 A---AAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | || ||| | | ||| | | ||| | ||||| |||||||| || || Sbjct 41425 ATGAACGACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGAC 41484 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA-CAA-GAAGTGCAAGTGACGGAGG 57774 |||||||| |||||||| || | || | ||||| ||| |||||||| ||| |||||| Sbjct 41485 GGTATTGTGAACGAGAACCTGTTGGAGCG--TTTCAGCAACGAAGTGCAGGTGGCGGAGG 41542 Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834 | | ||||| ||||| || || | || || ||| | || || || | || |||| Sbjct 41543 CTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGC 41602 Query 57835 TACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAACGCGATC 57893 | |||||||| |||||| | |||| || || || || |||||||||| ||| Sbjct 41603 TGCTCATCGACACGTACATCCGCGACA-CGGCGCAGCGCGAGTACCTGTTCAACGCTATC 41661 Query 57894 GAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA----AAAAG 57949 || || || |||| | ||||||| |||||| | | ||||| | ||| Sbjct 41662 GAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAG 41721 Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 || ||| ||||| | ||| | || | ||||| |||||||| || || || ||||| Sbjct 41722 CGT----GCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTT 41777 Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069 |||||| |||||| | || || ||| ||||||| || || || ||||| || ||| | Sbjct 41778 CTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTC 41837 Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129 ||| |||||| | || | || ||||||||||| || || || ||||||||| | | Sbjct 41838 GTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCT 41897 Query 58130 GTACTCTCACATTGTCAATAAACCGACGCGGGATCGCA---TCTTGGACATTATCACCGA 58186 || | |||| | || || | ||| | || || ||| || ||||| Sbjct 41898 GTTCAGTCAC---CTGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGA 41954 Query 58187 GGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTAT 58246 ||| ||| ||||||| || || ||| | || || || || || ||| | | |||| || Sbjct 41955 GGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCAT 42014 Query 58247 GAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT 58306 ||| | | | |||| |||||||||||||||| |||||| | || || ||| || Sbjct 42015 GAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCG--CT 42072 Query 58307 GATTGGAGAGCG--TCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCG 58364 | | || || ||| || ||| ||||| ||||| |||||| | |||||| Sbjct 42073 CTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCG 42132 Query 58365 CTCGAGGGCAAGACAAACTTTTTCGA 58390 || |||||||| | ||||||||||| Sbjct 42133 CTGCAGGGCAAGTCGAACTTTTTCGA 42158 >seq33 Length=1115382 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| |||||||| |||| ||||| | || Sbjct 831488 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTC 831429 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||| || | || || ||||| Sbjct 831428 GGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCA 831369 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| |||| ||| || | ||||| || || Sbjct 831368 ACAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 831309 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || || |||||||| ||||| ||| Sbjct 831308 CATCCAGAAGGAGAGCACTCTTCACCTGGTGCTT 831275 >seq27 Length=46380 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || ||||| ||||||||| | || || || | || Sbjct 326 CATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTC 267 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || |||||||||||| | || || ||||| Sbjct 266 AGACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 207 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || | || || ||||| || |||||||| || ||| ||||||| || || Sbjct 206 ACAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAA 147 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || |||||||| ||||| || | ||| | || |||| Sbjct 146 CATCCAGAAGGAGAGCACTCTTCACCTGGTTCTCCGTCTGCGCGGTGGTA 97 >seq59 Length=643831 Score = 102 bits (112), Expect = 7e-17 Identities = 166/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||| | ||||| ||||| || || || || ||||||||| | || || || | ||| Sbjct 401242 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401301 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || ||||| Sbjct 401302 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401361 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || || || ||||||| || ||| Sbjct 401362 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401421 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 || || || || ||||||||||| ||||| || | ||| | || ||| ||||||| Sbjct 401422 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGGTGCCAAGAAGCG 401480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766060103120