Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq23 152 6e-32
>seq23
Length=193243
Score = 152 bits (168), Expect = 6e-32
Identities = 439/670 (66%), Gaps = 4/670 (1%)
Strand=Plus/Plus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
|| ||||| | || |||||| |||| | || || || |||||||| ||||| || | |
Sbjct 26591 GGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCACC 26650
Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353
|| || || | || | || | | | ||| || || || ||||| ||
Sbjct 26651 CACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGG 26710
Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413
|||| ||| | | | ||| | |||||||| |||| ||| || || | | |||||
Sbjct 26711 TCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGG 26770
Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473
|| ||||| || ||||| || | ||| | || ||||| || | || | || ||||||
Sbjct 26771 CGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGC 26830
Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533
| ||||||||| | ||| || || ||||| ||||| ||| |||| || || |
Sbjct 26831 ACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGC-A 26889
Query 63534 CTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592
| || | ||||| || || || ||| | || ||| || || || || | |||
Sbjct 26890 GTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGT 26949
Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63652
||| || ||||| || || || || ||||| | || || || ||||| ||
Sbjct 26950 GTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTG 27009
Query 63653 GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63712
| | || ||||| || || | || ||||| || ||||||||| || || ||
Sbjct 27010 CGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGA 27069
Query 63713 AA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 63771
| |||| ||||||||||||||||| || | ||| ||||| ||||| || |
Sbjct 27070 CATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGCCA 27128
Query 63772 CACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGG 63831
||||||| | ||||||||| |||| ||| | | ||| ||| || || | ||| |
Sbjct 27129 CACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTACG 27188
Query 63832 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 63891
| ||||| || || || ||||| ||||||| ||||| || |||||||| | |
Sbjct 27189 AGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACAG 27248
Query 63892 CCGAATTGAG 63901
|||| | |||
Sbjct 27249 CCGAGTCGAG 27258
Score = 114 bits (126), Expect = 2e-20
Identities = 387/598 (65%), Gaps = 10/598 (2%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| ||| || || || ||| ||||||||||||||| | |||| | ||||| ||
Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|||| || || ||||| || |||||||| || ||||| || || || || || || ||
Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750
|| |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| |
Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722
Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808
|||| ||||| | ||||| |||||||||| || ||| || || || ||
Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662
Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868
|| || || || || || | | | || | || || ||||| | ||
Sbjct 41661 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 41602
Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928
|| | ||||| |||||||| || || ||||| || |||||||| || | |||
Sbjct 41601 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 41542
Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988
||| | | ||||||||| | | || || || | || || ||||| || || ||
Sbjct 41541 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 41482
Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----A 34044
|| || || ||||| | || | | ||| | |||| || |||
Sbjct 41481 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGT-TGTCGTTCATGC 41423
Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104
| || | ||| || | | || || || | ||| || || || | ||||| || || |
Sbjct 41422 GGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGG 41363
Query 34105 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|||| ||||| || ||||| |||||| || || || |||| ||||| | |||||
Sbjct 41362 CCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817119764080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |