Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq23 152 6e-32 >seq23 Length=193243 Score = 152 bits (168), Expect = 6e-32 Identities = 439/670 (66%), Gaps = 4/670 (1%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | || |||||| |||| | || || || |||||||| ||||| || | | Sbjct 26591 GGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCACC 26650 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || | || | | | ||| || || || ||||| || Sbjct 26651 CACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGG 26710 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 |||| ||| | | | ||| | |||||||| |||| ||| || || | | ||||| Sbjct 26711 TCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGG 26770 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || ||||| || | || | || |||||| Sbjct 26771 CGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGC 26830 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | ||||||||| | ||| || || ||||| ||||| ||| |||| || || | Sbjct 26831 ACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGC-A 26889 Query 63534 CTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | || | ||||| || || || ||| | || ||| || || || || | ||| Sbjct 26890 GTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGT 26949 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63652 ||| || ||||| || || || || ||||| | || || || ||||| || Sbjct 26950 GTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTG 27009 Query 63653 GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63712 | | || ||||| || || | || ||||| || ||||||||| || || || Sbjct 27010 CGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGA 27069 Query 63713 AA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGA 63771 | |||| ||||||||||||||||| || | ||| ||||| ||||| || | Sbjct 27070 CATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGCCA 27128 Query 63772 CACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGG 63831 ||||||| | ||||||||| |||| ||| | | ||| ||| || || | ||| | Sbjct 27129 CACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTACG 27188 Query 63832 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 63891 | ||||| || || || ||||| ||||||| ||||| || |||||||| | | Sbjct 27189 AGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACAG 27248 Query 63892 CCGAATTGAG 63901 |||| | ||| Sbjct 27249 CCGAGTCGAG 27258 Score = 114 bits (126), Expect = 2e-20 Identities = 387/598 (65%), Gaps = 10/598 (2%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| ||| || || || ||| ||||||||||||||| | |||| | ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 |||| || || ||||| || |||||||| || ||||| || || || || || || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750 || |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| | Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808 |||| ||||| | ||||| |||||||||| || ||| || || || || Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868 || || || || || || | | | || | || || ||||| | || Sbjct 41661 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 41602 Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928 || | ||||| |||||||| || || ||||| || |||||||| || | ||| Sbjct 41601 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 41542 Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988 ||| | | ||||||||| | | || || || | || || ||||| || || || Sbjct 41541 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 41482 Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----A 34044 || || || ||||| | || | | ||| | |||| || ||| Sbjct 41481 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGT-TGTCGTTCATGC 41423 Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104 | || | ||| || | | || || || | ||| || || || | ||||| || || | Sbjct 41422 GGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGG 41363 Query 34105 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||| ||||| || ||||| |||||| || || || |||| ||||| | ||||| Sbjct 41362 CCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817119764080