Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq23 156 6e-33 >seq23 Length=193243 Score = 156 bits (172), Expect = 6e-33 Identities = 442/672 (66%), Gaps = 8/672 (1%) Strand=Plus/Plus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | || |||||| |||| | || || || |||||||| ||||| || | | Sbjct 26591 GGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCACC 26650 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || | || | | | ||| || || || ||||| || Sbjct 26651 CACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGG 26710 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 |||| ||| | | | ||| |||||||| |||| ||| || || | | ||||| Sbjct 26711 TCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGG 26770 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | ||| | || ||||| || | || | || |||||| Sbjct 26771 CGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGC 26830 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||| ||| ||| || || ||||| ||||| ||| | || || || | Sbjct 26831 ACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGC-A 26889 Query 66327 CTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385 | || | ||||| || || || ||| | || ||| || || || || | ||| Sbjct 26890 GTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGT 26949 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445 || || |||||||| || || ||| ||||| | || || || ||||| || Sbjct 26950 GTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTG 27009 Query 66446 GTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503 | || | || ||||| || || | || ||||| || ||||||||| || || Sbjct 27010 CGGGTTCGGC--GTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCG 27067 Query 66504 GAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 66562 || | |||| ||||||||||||||||| || | ||| ||||| ||||| || Sbjct 27068 GACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGC 27126 Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622 |||||||| | ||||||||| |||| ||| ||| |||| ||| || || | ||| Sbjct 27127 CACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTA 27186 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682 || ||||| || || || ||||| ||||||| ||||| || |||||||| | Sbjct 27187 CGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCAC 27246 Query 66683 AACCGAGTTGAG 66694 | |||||| ||| Sbjct 27247 AGCCGAGTCGAG 27258 Score = 118 bits (130), Expect = 1e-21 Identities = 183/258 (71%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| ||| || || || ||| ||| ||||||||||| | |||| | ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 |||| || || ||||| || |||||||| || ||||| || || |||||||| || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 36326 || ||||| || || || || || ||||| || | ||| | ||| | | ||| ||||| Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 36327 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 |||| ||||| | ||||| |||||||||| || ||| || || ||||| Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 36385 TATAGCATTAAAGAGATA 36402 ||||| || || || || Sbjct 41661 GATAGCGTTGAACAGGTA 41644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172298143240