Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq23 154 2e-32 >seq23 Length=193243 Score = 154 bits (170), Expect = 2e-32 Identities = 596/919 (65%), Gaps = 22/919 (2%) Strand=Plus/Plus Query 79666 ATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTT 79725 || || || ||||| ||||| | ||| || || || | || | ||| || ||||| Sbjct 26351 ATAATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTTTTGGTTGCTCTTG 26410 Query 79726 TTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATA 79785 ||| |||||||| || |||||||||||| | || || || |||| | || | | Sbjct 26411 CGGTTCGCAGCATCCTTGTACAGAATGAACGGATTGCCCGTCTCCGTCTGTGCCTCGAGA 26470 Query 79786 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGT 79843 || || | ||| | | || | ||||| | || ||| | | | ||| || |||| Sbjct 26471 ATAGCGTACCACA-GCTTCTGCGCCTTGACCTTACGACG-GAAACGACCTTCGCTCTCGT 26528 Query 79844 ATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901 | | | ||| | || || ||||| || || | || | | ||||| || || Sbjct 26529 ACTTTTCGTACAGCTTC--TCAAACTCCTCGCCGTAGCAGTCCGCCAGGCCAGGGCACTC 26586 Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961 ||| ||||| | || |||||| || | | || || || |||||||| ||||| || Sbjct 26587 CGAAGGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGG 26646 Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT--TTCCTGTA-TTCTT 80018 | ||| || || | || | || | | | || | |||| || | || ||||| Sbjct 26647 CACCCACAGCGCCAGGAAAATGTCACGCGCAC---GCACTTCGTCCTTGCCGTGGTTCTT 26703 Query 80019 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 80078 || |||| ||| | | | ||| | |||||||| |||| ||| || || | | Sbjct 26704 GCGCAGGTCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGC 26763 Query 80079 TCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 80138 || || || ||||| || ||||| || | ||| | || ||||| || | || | || Sbjct 26764 ACCAGGGCGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAG 26823 Query 80139 CATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 80198 |||||| | |||||| ||| ||| || || ||||| ||||| ||| |||| || Sbjct 26824 CATTGGCACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCG 26883 Query 80199 AATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 80257 || | | || | ||||| || || || ||| | || ||| || || || | Sbjct 26884 GATGC-AGTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCT 26942 Query 80258 TTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAG 80317 | | ||| || || |||||||| || || || ||||| | || || || | Sbjct 26943 TGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACG 27002 Query 80318 ACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 |||| || | || | || ||||| || || | || ||||| || ||||||||| Sbjct 27003 ACATCTGCGGGTTCGGC--GTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGC 27060 Query 80376 TTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTC 80434 || || |||| |||| ||||||||||||||||| || | ||| ||||| | Sbjct 27061 CTTCTCGGACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGC 27119 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 |||| || |||||||| | ||||||||| |||| ||| ||| |||| || || || Sbjct 27120 CTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCA 27179 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 | ||| || ||||| || || || ||||| ||||||| ||||| || |||| Sbjct 27180 GAAGGTACGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGT 27239 Query 80555 AAATAATAACCGAGTTGAG 80573 |||| | | |||||| ||| Sbjct 27240 AAATCACAGCCGAGTCGAG 27258 Score = 147 bits (162), Expect = 3e-30 Identities = 394/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || || || ||| ||||||||||||||| | |||| || ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 |||| || || ||||| || |||||||| || ||||| || || |||||||| || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCGC- 50128 || |||||||| || || || |||||||| || ||||| | ||| | | ||| ||| | Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 50129 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 |||| ||||| | ||||| |||||||||| || ||| || || || || Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 || || || || || || | | | || | || || ||||| | || Sbjct 41661 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 41602 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 || | ||||| |||||||| || || ||||| || |||||||| || | ||| Sbjct 41601 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 41542 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 ||| | | ||||||||| | | || || || | || || ||||| || ||||| Sbjct 41541 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 41482 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAG 50423 || || || ||||| | || | | ||| || |||||| || | | Sbjct 41481 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCG 41422 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || | ||| || | | || || || | ||| || || || | ||||| || || || Sbjct 41421 GTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGC 41362 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||| ||||| || ||||| |||||| || || || |||| ||||| | ||||| Sbjct 41361 CTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268252320040