Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq23 141 1e-28
>seq23
Length=193243
Score = 141 bits (156), Expect = 1e-28
Identities = 354/531 (67%), Gaps = 14/531 (3%)
Strand=Plus/Plus
Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192
|||||||| |||| ||| || || | | || || || ||||| || ||||| || | |
Sbjct 26735 TGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGGCGCTTGTTGCCGCCCTGGTCAACG 26794
Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252
|| | || ||||| || | || | || |||||| | |||||| ||| |||| ||
Sbjct 26795 TACCGCGCCGTGTTGTTGAACACACGCAGCATTGGCACAATACCGTTGCTCACACCGTTC 26854
Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT----AGACCTATTCC 72308
|| ||||| ||||| ||| |||| || || || | | ||| ||||| || ||
Sbjct 26855 GTGCCGGAAATATACGAGCCAGTGGCGCGGAT---GC-AGTGGATGTTCAGACCAATACC 26910
Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368
|| ||| | || ||| || || || || | ||| || || |||||||| ||
Sbjct 26911 ACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGA 26970
Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCA 72426
|| ||| ||||| | || || || ||||| || | || | || |||||
Sbjct 26971 GTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTGCGGGTTCGGC--GTACCCGCG 27028
Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTC 72485
|| || | || ||||| || ||||||||| || || |||| |||| |||||||||||
Sbjct 27029 TTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGACATGTAG-TTGTACGTCTC 27087
Query 72486 AATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTG 72545
|||||| || | ||| || || ||||| || |||||||| | ||| |||||
Sbjct 27088 AATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTG 27147
Query 72546 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 72605
|||| ||| ||| |||| || || || | ||| || ||||| || || ||
Sbjct 27148 CGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTACGAGCGTTCCAGCGTCTTGAA 27207
Query 72606 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656
||||| ||||||| ||||| || |||||||| | | |||| | |||
Sbjct 27208 GCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACAGCCGAGTCGAG 27258
Score = 114 bits (126), Expect = 2e-20
Identities = 182/258 (71%), Gaps = 5/258 (2%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| ||| || || || ||| |||||||||||| || | |||| | ||||| ||
Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|||| || || ||||| || |||||||| || ||||| || || |||||||| || ||
Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 42233
|| |||||||| || || || || ||||| || | ||| | ||| | | ||| |||||
Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722
Query 42234 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291
|||| ||||| | ||||| |||||||||| || ||| || || || ||
Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662
Query 42292 TATGGCATTAAAGAGATA 42309
|| || || || || ||
Sbjct 41661 GATAGCGTTGAACAGGTA 41644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138688256360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |