Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq23 141 1e-28 >seq23 Length=193243 Score = 141 bits (156), Expect = 1e-28 Identities = 354/531 (67%), Gaps = 14/531 (3%) Strand=Plus/Plus Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192 |||||||| |||| ||| || || | | || || || ||||| || ||||| || | | Sbjct 26735 TGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGGCGCTTGTTGCCGCCCTGGTCAACG 26794 Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252 || | || ||||| || | || | || |||||| | |||||| ||| |||| || Sbjct 26795 TACCGCGCCGTGTTGTTGAACACACGCAGCATTGGCACAATACCGTTGCTCACACCGTTC 26854 Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT----AGACCTATTCC 72308 || ||||| ||||| ||| |||| || || || | | ||| ||||| || || Sbjct 26855 GTGCCGGAAATATACGAGCCAGTGGCGCGGAT---GC-AGTGGATGTTCAGACCAATACC 26910 Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368 || ||| | || ||| || || || || | ||| || || |||||||| || Sbjct 26911 ACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGA 26970 Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCA 72426 || ||| ||||| | || || || ||||| || | || | || ||||| Sbjct 26971 GTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTGCGGGTTCGGC--GTACCCGCG 27028 Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTC 72485 || || | || ||||| || ||||||||| || || |||| |||| ||||||||||| Sbjct 27029 TTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGACATGTAG-TTGTACGTCTC 27087 Query 72486 AATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTG 72545 |||||| || | ||| || || ||||| || |||||||| | ||| ||||| Sbjct 27088 AATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTG 27147 Query 72546 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 72605 |||| ||| ||| |||| || || || | ||| || ||||| || || || Sbjct 27148 CGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTACGAGCGTTCCAGCGTCTTGAA 27207 Query 72606 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 ||||| ||||||| ||||| || |||||||| | | |||| | ||| Sbjct 27208 GCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACAGCCGAGTCGAG 27258 Score = 114 bits (126), Expect = 2e-20 Identities = 182/258 (71%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || || || ||| |||||||||||| || | |||| | ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 |||| || || ||||| || |||||||| || ||||| || || |||||||| || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 42233 || |||||||| || || || || ||||| || | ||| | ||| | | ||| ||||| Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 42234 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 |||| ||||| | ||||| |||||||||| || ||| || || || || Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 42292 TATGGCATTAAAGAGATA 42309 || || || || || || Sbjct 41661 GATAGCGTTGAACAGGTA 41644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138688256360