Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq23 237 2e-57 >seq23 Length=193243 Score = 237 bits (262), Expect = 2e-57 Identities = 577/866 (67%), Gaps = 25/866 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | || || || || |||| |||||||| |||||| ||||||| || Sbjct 41311 CTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTC 41370 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | || |||||||||||||| |||||| || |||| ||||| | || ||| Sbjct 41371 TGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGACAACCGCATGAAC 41430 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | ||| | | | | || ||||| |||| || || || || Sbjct 41431 GACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATT 41490 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TG 125233 || ||||| || |||||| || ||| | || || | | |||| ||| || Sbjct 41491 GTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGCGGAGGC-TCGCTG 41549 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||| ||||| ||||| || ||||| |||||| | |||||||| | ||||| || || Sbjct 41550 CTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGCTGCTCAT 41609 Query 125294 TGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGACAC 125350 |||| |||||| ||||| || || || | || || || ||||| ||||| || Sbjct 41610 CGACACGTACATCCGCGACACGGCGCAGCGCGAGTACCTGTTC---AACGCTATCGAGAC 41666 Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || | | | ||||| | |||| |||| ||||| || |||||| Sbjct 41667 CATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGAT---TGCGGACAAGCG 41723 Query 125411 T---TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | |||| | | || | || ||||| || |||||||| |||||||||||||| ||||| Sbjct 41724 TGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGG 41783 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 |||||| | ||||| ||||| |||||||| || |||||||| || ||| || | Sbjct 41784 CTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTC 41843 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 |||||| |||| | || |||||||| || ||| |||||||| | ||||| Sbjct 41844 GAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTT--- 41900 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 || | ||| || | || | ||| | ||||| | ||| | ||||| Sbjct 41901 CAGTCACCTG------AAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGA 41954 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || || ||| || | || ||| | || || | || || || | || ||||| Sbjct 41955 GGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCAT 42014 Query 125708 GAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766 ||| ||| | || |||||| ||||||| ||||||||||| || ||||| ||| || Sbjct 42015 GAA-TGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTC 42073 Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCAC 125826 | || ||| ||| || | | |||||| ||||| || ||| | ||| || | Sbjct 42074 TCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGC 42133 Query 125827 TAGAGGGTAAGACCAACTTTTTCGAG 125852 | |||| ||| | |||||||||||| Sbjct 42134 TGCAGGGCAAGTCGAACTTTTTCGAG 42159 Score = 197 bits (218), Expect = 2e-45 Identities = 365/530 (69%), Gaps = 4/530 (1%) Strand=Plus/Minus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 ||||||||||| | ||| ||| | | | || |||||| ||||||||||| || Sbjct 26832 GTGCCAATGCTGCGTGTGTTCAACAACACGGCGCGGTACGTTGACCAGGGCGGCAACAAG 26773 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 || || || || | || ||||| |||| || |||||| |||| || ||||| |||||| Sbjct 26772 CGCCCTGGTGCGTTTGCGATCTACCTGGAGCCGTGGCACCCGGATGTGTTTGAGTTTATC 26713 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 || ||||||| ||| ||| || || | || || | ||| | || || || Sbjct 26712 GACCTGCGCAAGAACCACGGCAAGGACGAAGTGCGTGCGCGTGACATTTTCCTGGCGCTG 26653 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070 |||||||||||| |||| |||||||| ||| | | ||| | ||| || |||||| Sbjct 26652 TGGGTGCCAGATCTGTTTATGAAGCGTGTCGAGCAGAACGGCGAGTGGGCGCTTATGTGC 26593 Query 97071 CCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACG 97130 || || || || ||| | || |||| ||||| ||||||||| |||| Sbjct 26592 CCTTCGGAGTGCCCTGGCCTGGCGGACTGCTACGGCGAGGAGTTTGAGAAGCTGTACGAA 26533 Query 97131 GCCTACGAGCAAGAGGGCCGATAC-GTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGG 97188 |||||| || || || | | || | | ||| | || | |||| |||||| | | Sbjct 26532 AAGTACGAGAGCGAAGGTCGTTTCCGTCGTAAG-GTCAAGGCGC-AGAAGCTGTGGTACG 26475 Query 97189 CCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGA 97248 | || | ||| ||| ||||| || | ||||| |||||| ||||||||| | | || Sbjct 26474 CTATTCTCGAGGCACAGACGGAGACGGGCAATCCGTTCATTCTGTACAAGGATGCTGCGA 26415 Query 97249 ATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAA 97308 | ||||| ||||||||| || | ||||| |||||| |||| || ||||||||||| | Sbjct 26414 ACCGCAAGAGCAACCAAAAGAACCTCGGCACGATCAAGAGCTCGAACCTGTGCACGGAGA 26355 Query 97309 TTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCG 97358 || | |||||| ||| || || |||||||| || ||| ||||| ||| Sbjct 26354 TTATCGAGTACTGCTCGCCCGATGAGACGGCCGTGTGCAACCTGGCCTCG 26305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058634942360