Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq33 86.0 5e-12
seq27 82.4 6e-11
>seq33
Length=1115382
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||| ||||||||||| || |||||||| || || | || || |||||||||||||
Sbjct 831285 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTGAGGGTGCGGCCGTCCTCCAGCTG 831343
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| || |||| | |||||| || ||| || | || ||||||||| || ||
Sbjct 831344 CTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 831403
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | || || || | ||||| ||||| || || || || || ||
Sbjct 831404 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGT 831463
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || |||||
Sbjct 831464 CAGAGTCTTGACGAAGATTTGCAT 831487
>seq27
Length=46380
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
||||| ||||||||||| || |||||||| || || | || ||| | ||||||| |||
Sbjct 123 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTG-CGCCCATCCTCCAACTG 181
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| | | || || || || || ||| || | || |||||||||| || ||
Sbjct 182 CTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 241
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | || || || | ||||||| ||| | || || || || || ||
Sbjct 242 AGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGT 301
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||| || || || ||||| |||||
Sbjct 302 GAGCGTCTTAACGAAAATTTGCAT 325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250886826061
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |