Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq33 86.0 5e-12 seq27 82.4 6e-11 >seq33 Length=1115382 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| ||||||||||| || |||||||| || || | || || ||||||||||||| Sbjct 831285 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTGAGGGTGCGGCCGTCCTCCAGCTG 831343 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || |||| | |||||| || ||| || | || ||||||||| || || Sbjct 831344 CTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 831403 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || || | ||||| ||||| || || || || || || Sbjct 831404 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGT 831463 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || ||||| Sbjct 831464 CAGAGTCTTGACGAAGATTTGCAT 831487 >seq27 Length=46380 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| ||||||||||| || |||||||| || || | || ||| | ||||||| ||| Sbjct 123 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTG-CGCCCATCCTCCAACTG 181 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || || || || || ||| || | || |||||||||| || || Sbjct 182 CTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 241 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || || | ||||||| ||| | || || || || || || Sbjct 242 AGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGT 301 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || ||||| ||||| Sbjct 302 GAGCGTCTTAACGAAAATTTGCAT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250886826061