Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq23 165 1e-35 >seq23 Length=193243 Score = 165 bits (182), Expect = 1e-35 Identities = 444/672 (66%), Gaps = 8/672 (1%) Strand=Plus/Plus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||| | || |||||| |||| | || || || |||||||| ||||| || | | Sbjct 26591 GGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCACC 26650 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || | || | || | | | ||| || || || ||||| || Sbjct 26651 CACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGG 26710 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 |||| ||| | | | ||| | |||||||| |||| ||| || || | | ||||| Sbjct 26711 TCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGG 26770 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | ||| | || ||||| || | || | || |||||| Sbjct 26771 CGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGC 26830 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482 | ||||||||| | ||| || || ||||| ||||| ||| |||| || || | Sbjct 26831 ACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGC-A 26889 Query 63483 CTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541 | || | ||||| || || || ||| | || ||| || || || || | ||| Sbjct 26890 GTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGT 26949 Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601 ||| || || ||||| || || || ||||| | || || || ||||| || Sbjct 26950 GTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTG 27009 Query 63602 GTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659 | || | || ||||| || || | || ||||| || ||||||||| || || Sbjct 27010 CGGGTTCGGC--GTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCG 27067 Query 63660 GAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718 || | |||| ||||||||||||||||| || | ||| ||||| ||||| || Sbjct 27068 GACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGC 27126 Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778 |||||||| | ||||||||| |||| ||| ||| |||| ||| || || | ||| Sbjct 27127 CACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTA 27186 Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 || ||||| || || || ||||| ||||||| ||||| || |||||||| | Sbjct 27187 CGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCAC 27246 Query 63839 AACCGAGTTGAG 63850 | |||||| ||| Sbjct 27247 AGCCGAGTCGAG 27258 Score = 123 bits (136), Expect = 3e-23 Identities = 389/598 (65%), Gaps = 10/598 (2%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| ||| || || || ||| ||||||||||||||| | |||| || ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 |||| || || ||||| || |||||||| || ||||| || || || || || || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33472 || |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| | Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 33473 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530 |||| ||||| | ||||| |||||||||| || ||| || || || || Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590 || || || || || || | | | || | || || ||||| | || Sbjct 41661 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 41602 Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650 || | ||||| |||||||| || || ||||| || |||||||| || | ||| Sbjct 41601 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 41542 Query 33651 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTC 33710 ||| | | ||| ||||| | | || || ||| || || || ||||| || ||||| Sbjct 41541 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 41482 Query 33711 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----A 33766 || || || ||||| | || | | ||| | |||| || ||| Sbjct 41481 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGT-TGTCGTTCATGC 41423 Query 33767 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 33826 | || | ||| || | | || || || | ||| || || || | ||||| || || | Sbjct 41422 GGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGG 41363 Query 33827 CCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||| ||||| || ||||| |||||| || | || |||| ||||| | ||||| Sbjct 41362 CCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946725002760