Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq23 165 1e-35
>seq23
Length=193243
Score = 165 bits (182), Expect = 1e-35
Identities = 444/672 (66%), Gaps = 8/672 (1%)
Strand=Plus/Plus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||| | || |||||| |||| | || || || |||||||| ||||| || | |
Sbjct 26591 GGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCACC 26650
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| || || | || | || | | | ||| || || || ||||| ||
Sbjct 26651 CACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGG 26710
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
|||| ||| | | | ||| | |||||||| |||| ||| || || | | |||||
Sbjct 26711 TCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGG 26770
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| ||||| || ||||| || | ||| | || ||||| || | || | || ||||||
Sbjct 26771 CGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGC 26830
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482
| ||||||||| | ||| || || ||||| ||||| ||| |||| || || |
Sbjct 26831 ACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGC-A 26889
Query 63483 CTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541
| || | ||||| || || || ||| | || ||| || || || || | |||
Sbjct 26890 GTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGT 26949
Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601
||| || || ||||| || || || ||||| | || || || ||||| ||
Sbjct 26950 GTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTG 27009
Query 63602 GTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63659
| || | || ||||| || || | || ||||| || ||||||||| || ||
Sbjct 27010 CGGGTTCGGC--GTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCG 27067
Query 63660 GAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| | |||| ||||||||||||||||| || | ||| ||||| ||||| ||
Sbjct 27068 GACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGC 27126
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | ||||||||| |||| ||| ||| |||| ||| || || | |||
Sbjct 27127 CACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTGCCGTTGATGCGCAGAAGGTA 27186
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
|| ||||| || || || ||||| ||||||| ||||| || |||||||| |
Sbjct 27187 CGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCAC 27246
Query 63839 AACCGAGTTGAG 63850
| |||||| |||
Sbjct 27247 AGCCGAGTCGAG 27258
Score = 123 bits (136), Expect = 3e-23
Identities = 389/598 (65%), Gaps = 10/598 (2%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| ||| || || || ||| ||||||||||||||| | |||| || ||||| ||
Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|||| || || ||||| || |||||||| || ||||| || || || || || || ||
Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33472
|| |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| |
Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722
Query 33473 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33530
|||| ||||| | ||||| |||||||||| || ||| || || || ||
Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662
Query 33531 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33590
|| || || || || || | | | || | || || ||||| | ||
Sbjct 41661 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 41602
Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650
|| | ||||| |||||||| || || ||||| || |||||||| || | |||
Sbjct 41601 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 41542
Query 33651 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTC 33710
||| | | ||| ||||| | | || || ||| || || || ||||| || |||||
Sbjct 41541 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 41482
Query 33711 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----A 33766
|| || || ||||| | || | | ||| | |||| || |||
Sbjct 41481 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGT-TGTCGTTCATGC 41423
Query 33767 GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATG 33826
| || | ||| || | | || || || | ||| || || || | ||||| || || |
Sbjct 41422 GGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGG 41363
Query 33827 CCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|||| ||||| || ||||| |||||| || | || |||| ||||| | |||||
Sbjct 41362 CCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946725002760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |