Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq59 84.2 2e-11
seq33 84.2 2e-11
>seq59
Length=643831
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | ||| |||| || || || |||||||| || |||||||||||| |
Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || || || || | || || |||||||||||| |||
Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || || || |||||| | | | |||||| | ||||
Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGC--CTTCACATTCTCGATCGTGTCGGAAGACTCCA 401291
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||| || || ||||| || || ||||| || | |||||
Sbjct 401290 CCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242
>seq33
Length=1115382
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||| |||||| || |||||||||||| | ||| | |||||
Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| || || || || |||| || |||||||||||| ||| | ||||| |||||
Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || |||||| | | | | ||||| || ||| || | ||||| |
Sbjct 831396 TGGATCTTGGC--CTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCG 831453
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || || ||||| || ||||| || || |||||
Sbjct 831454 TCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087698842390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |