Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq30 95.1 8e-15
seq27 86.0 4e-12
>seq30
Length=7530
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 3326 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 3385
Query 20007 GGTAATATTTAGCCTTA 20023
||||||||| |||
Sbjct 3386 CCCGATATTTAGCTTTA 3402
Score = 84.2 bits (92), Expect = 1e-11
Identities = 55/61 (90%), Gaps = 5/61 (8%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1470 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1529
Query 25957 T 25957
|
Sbjct 1530 T 1530
>seq27
Length=46380
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||| | |||| ||||||||||||||||| || || ||||| ||
Sbjct 97 TACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 156
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|| | || | || || || || || || ||||| || | ||||||||| || | |
Sbjct 157 TCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAG 216
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || || ||||||||| | || || ||| | || |
Sbjct 217 GAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCA 276
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || | || || || || || || | || || ||||| || ||||||
Sbjct 277 CCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATG 326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946950987691
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |