Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq23 161 1e-34 >seq23 Length=193243 Score = 161 bits (178), Expect = 1e-34 Identities = 625/970 (64%), Gaps = 28/970 (3%) Strand=Plus/Plus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| ||||| || || || ||||| | || |||||| |||| | || || || | Sbjct 26571 CCAGGCCAGGGCACTCCGAAGGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCT 26630 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 ||||||| ||||| || | ||| || || | || | || | | | ||| || | Sbjct 26631 TCATAAACAGATCTGGCACCCACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCT 26690 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| || |||| ||| | | | ||| | |||||||| |||| || Sbjct 26691 TGCCGTGGTTCTTGCGCAGGTCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGT 26750 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | || || | | ||||| || ||||| || ||||| || | ||| | || ||||| | Sbjct 26751 AGATCGCAAACGCACCAGGGCGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGT 26810 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | | || | || |||||| | |||||| ||| ||| || || || || ||||| Sbjct 26811 TGAACACACGCAGCATTGGCACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACG 26870 Query 63318 TTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATT 63376 ||| |||| || || | | || | ||||| || || || ||| | || ||| Sbjct 26871 AGCCAGTGGCGCGGATGC-AGTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATC 26929 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 || || || || | ||| || || |||||||| || || ||| ||||| | Sbjct 26930 AACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACA 26989 Query 63437 AGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63494 || || || ||||| || | || | || ||||| || || | || ||||| | Sbjct 26990 AGGAAGCACGACGACATCTGCGGGTTCGGC--GTACCCGCGTTGAACAGCGTCGGAGAGG 27047 Query 63495 CGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC 63553 | || |||||| || || || | |||| ||||||||||||||||| || | ||| Sbjct 27048 CATGCGTAAACGCCTTCTCGGACATGTAG-TTGTACGTCTCAATAGCGCTCTCCACGTCC 27106 Query 63554 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 ||||| ||||| || |||||||| | ||||||||| |||| ||| ||| |||| Sbjct 27107 TCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCTTG 27166 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63673 ||| || || | ||| || ||||| || || || ||||| ||||||| Sbjct 27167 CCGTTGATGCGCAGAAGGTACGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAGTGG 27226 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 63733 ||||| || |||||||| | | |||||| ||| ||| | || || | ||| || Sbjct 27227 AAGTCGCGCTCGTAAATCACAGCCGAGTCGAGACGTTCCCT---GTTCTTCATCACAGCC 27283 Query 63734 ATGGTAATACT----TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTT 63789 | ||| || || || ||||| | | || ||| | || || |||||||||| Sbjct 27284 -TTGTACGTCTCCTCAGAGATCATAGGGCCAGGCTTGCCAGTCTTCGGGTTGACATAGTC 27342 Query 63790 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT-A 63848 | | | ||||| | || | ||||| || || || |||||||| | | ||| | | Sbjct 27343 GTACAGATCCTGAACGACCTGGCTAAAGTTCTTCTTGGTCTCTTTGTGCA-AGTTGCTGA 27401 Query 63849 CGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT-----GTTGTGTAGTACAAGTGGC 63903 ||| || | || || || | ||||| || || | ||||| | |||| || Sbjct 27402 TGGCAATACGCGCTGCAAGCACAGCATAGTCAGGGTGGGTCGTTGTCTTGTAC-----GC 27456 Query 63904 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTG 63963 || | || || || || |||||| || || || || ||||| | || || || | Sbjct 27457 AGCCGTCTCAGCAGCAAGGTTGTCCAGCTCCACGGTCGTGACACCTTCGTAGATACCATC 27516 Query 63964 GATAACCTTC 63973 || |||||| Sbjct 27517 AATGACCTTC 27526 Score = 114 bits (126), Expect = 2e-20 Identities = 182/258 (71%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||| || || || ||| ||| ||||||||||| | |||| | ||||| || Sbjct 41900 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 41841 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 |||| || || ||||| || |||||||| || ||||| || || |||||||| || || Sbjct 41840 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 41781 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 32829 || ||||| || || || || || ||||| || | ||| | ||| | | ||| ||| | Sbjct 41780 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 41722 Query 32830 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 |||| ||||| | ||||| |||||||||| || ||| || || ||||| Sbjct 41721 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 41662 Query 32888 TATAGCATTAAAGAGATA 32905 ||||| || || || || Sbjct 41661 GATAGCGTTGAACAGGTA 41644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631516855600