Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq59 98.7 9e-16 seq33 95.1 1e-14 seq60 84.2 2e-11 >seq59 Length=643831 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | ||||| || | ||||| | || |||||||| || Sbjct 401242 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401301 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 401302 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401361 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| ||||| || |||| ||||| Sbjct 401362 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401421 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 401422 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCT 401453 >seq33 Length=1115382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| |||| || ||||| || Sbjct 831487 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 831428 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 831427 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 831368 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || || | || || | ||||| | |||| ||||| Sbjct 831367 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 831308 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 831307 ATCCAGAAGGAGAGCACTCTTCACCTGGTGCT 831276 >seq60 Length=383220 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 25038 ACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAA 25096 ||| | ||||| || || || ||||| || || | || | ||| || ||| ||||| Sbjct 383218 ACATTGGAAGTCGAATCCTCGGACACGATTGA-TAACGTCAAGGCTAAGATCCAGGACAA 383160 Query 25097 AGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGA 25156 || || |||||||| ||||||||||| ||||||| || || || || | || |||| Sbjct 383159 GGAGGGCATTCCACCGGACCAACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGG 383100 Query 25157 TCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 |||||| || |||| ||||| || || || || |||||| || Sbjct 383099 CCGCACTCTGAGCGACTACAACATCCAGAAGGAGAGCACGCTGCA 383055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327677847715