Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq22 134 3e-26 seq23 123 5e-23 >seq22 Length=1423774 Score = 134 bits (148), Expect = 3e-26 Identities = 167/224 (75%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||||| ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 408828 GGTGAGGACCTGTGTAACTGTCAGTTCTCGCTCGCCTACGGTGCTAAGATTCTGCTGAAC 408769 Query 279405 TC---TACCC-GCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGG 279460 | ||||| || || ||||||||||| |||| || |||||| |||| ||||| Sbjct 408768 ACCGCTACCCTGCGTC----TCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAATGG 408713 Query 279461 AGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAA 279520 |||||||| || || ||||||||||| ||||||||| ||| ||| |||| Sbjct 408712 TTCGGGTAAGTCGACCCTTATGCGCGCCATCCAGAACGGTCAGGTGG-AGGGCTTCCCGT 408654 Query 279521 CGCAT-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||| | ||||| | ||| ||| || ||||||||| ||||| Sbjct 408653 CGCCTGAGGAGGTCAAGACCTGGTACGTCGAGCACGACCTCGAC 408610 Score = 122 bits (134), Expect = 2e-22 Identities = 337/512 (66%), Gaps = 6/512 (1%) Strand=Plus/Minus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAG 218565 |||||| | ||||||| ||| |||||||| | ||||| |||||| | || Sbjct 277371 ATCCCCATTTCTGACTTTATCAACAAGGAGTTGATTCTGTTCTCGATGGCGGACAACATT 277312 Query 218566 CGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCC 218625 || || |||||||| |||||||||| |||||||| ||||| || | || | || Sbjct 277311 CGCTCGATTCCCAGTATGGTGGATGGTCTCAAGCCGGGTCAGCGCAAAGTGCTGTATGGA 277252 Query 218626 GCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCC 218685 |||||||| || || ||||| ||||| ||| | ||||| || || Sbjct 277251 TGTTTCAAGCGCAATTTGAAGACGGAAATCAAGGTGCAGCAGCTGCAAGGTTACGTCTCG 277192 Query 218686 GAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCATGG 218743 ||| | | ||||| || || || ||||||||| || | | ||||| || ||| Sbjct 277191 GAACACACGGCGTACCACCATGGCGACCAGAGTCTGGTCATGACG--ATTGTCGGGTTGG 277134 Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCC-AACGGTCAGTTTGGT 218802 | ||||||||| || || |||||| ||||| | || ||| || || |||||||||||| Sbjct 277133 CGCAGGACTATTGTGGTAGCAACAACGTGAACCTTCT-CTCGCCGAATGGTCAGTTTGGT 277075 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 | ||| |||| || |||||| || ||| | || || || || | || | Sbjct 277074 ACGCGTAGTATGGGCGGTAAGGATGCCGCCAGTGCGCGTTACATTTTCACGGCGGTGCCA 277015 Query 218863 CCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGAC 218922 | | || ||| || | ||| ||| | ||||||| | | || || || | || ||| Sbjct 277014 CGTATTACACGCAAGCTTTTCCATCCGAAAGATGATGCGTTGCTGAACTACTTGGACGAC 276955 Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982 ||||| |||||||| || ||||| ||||||| | ||| |||| | ||| Sbjct 276954 GATGGCCAGAGTATTGAGCCGGAATGGTACGTGCCTGTCGTCCCGCAAGTGCTTTTGAAT 276895 Query 218983 GGTGCCAATGGTATCGGGACAGGGTTCAGTAC 219014 || || | ||||| || || || | ||||| Sbjct 276894 GGAGCGGAGGGTATTGGTACGGGCTGGAGTAC 276863 >seq23 Length=193243 Score = 123 bits (136), Expect = 5e-23 Identities = 549/847 (65%), Gaps = 43/847 (5%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 ||||| || ||||| || || |||||||||| ||| ||||| |||||| ||||| || Sbjct 42167 ACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAAT 42108 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 || || || | | ||| ||||| || | ||| || || || | | ||||| |||||| Sbjct 42107 GGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACA 42048 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || || |||||||| || | ||||| ||| | || Sbjct 42047 AACTCAATGTACTGGCACATGAGACGAGCATTCATGCCGAT-AAGCGACACAGGCAGAGC 41989 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 ||| | || ||||| ||| | | || ||||| | || || ||| ||| Sbjct 41988 CTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGACC-GTGT 41930 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGA 251850 ||| | | | |||| ||| | | |||| ||| || |||| | ||||||| Sbjct 41929 CAGGGTGCGAGCGCTTCTTCAGGTGACTGAACAGCAAGCACG-CAAAGTCGGTGTGCAGA 41871 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 |||||||| || | || | |||||| || | ||| || ||||| | ||||| ||| Sbjct 41870 CCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTC 41811 Query 251911 CTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCA 251969 | ||||||||||| | ||| ||| || || ||||| | | ||||| || | | Sbjct 41810 TTCAGCCAGAAGATCGACGC-AAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAA 41752 Query 251970 TGCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGA--CA-AGAACTTCTGTGC 252020 || ||||||||||| | ||||| ||||||| || | || ||| | || Sbjct 41751 CGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCC-GCAATCCAGCGAA-----GGGC 41698 Query 252021 CCATGCTGCCTTCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTC 252078 ||| | ||||||| ||| || |||| || || ||||| || | || || | | Sbjct 41697 CCACTCGGCCTTCTGCTTC--ACAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCG 41640 Query 252079 CGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 |||| || ||| |||| || || | || || ||||| ||||||| || ||| Sbjct 41639 CGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATG 41580 Query 252139 GATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTG 252198 || | | |||||| || | ||||| || || | | ||||| || Sbjct 41579 TTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTG 41520 Query 252199 --GAAAAGTTGTTTGCA--ATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCC 252254 |||| | | || | |||||| |||| || || || | || ||||| | Sbjct 41519 CTGAAACG----CTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGC 41464 Query 252255 AAGAATGGTCTTGATGAAGTGACGCTCATCGTCGT---TGAGCTTGTCACGCCAGTCG-G 252310 ||| | ||| | | ||||||||||| | ||||| || | ||||| ||||||| | Sbjct 41463 AAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTC---CCAGTCGTG 41407 Query 252311 CAATGTCCTGATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGT 252370 ||| ||||| |||| || || || | |||||||| | || | | |||||||||| Sbjct 41406 CAA-GTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGT 41348 Query 252371 ACATTGC 252377 |||| || Sbjct 41347 ACATCGC 41341 Score = 86.0 bits (94), Expect = 1e-11 Identities = 227/341 (67%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 293032 GTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCA--TAGACTTCAGTGTGG 293089 || || |||||||||||||| ||||||| |||| || || | | | | | || | Sbjct 25439 GTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATCGACGTAAGCTGGCC--GAACGTCG 25496 Query 293090 GAGTGGCCAGGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAG 293149 | | | |||| | ||||| |||||| |||| || || |||||||| || || | Sbjct 25497 GCGAGCTCAGGTGGATGTTCAAGCTCTGGCTCTGGCAGATGAACGCACCACGGTCCGCCG 25556 Query 293150 CGAGGTC---AATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGA 293206 | ||| ||| || ||| || ||||||||| |||||||||| ||||||| Sbjct 25557 ACATGTCGATAATGACCTTCTGGCTA---ATCTCCCACACGGTCTTGTACAGCGCCTTGA 25613 Query 293207 CATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCT 293266 | |||||||| || || ||||| || || |||| ||||| || | | || Sbjct 25614 TGTGGTCGGGAATGCCAGGGACGTTTTGGATCGAGCCGCCGTGCGCAATGATGCGCTGCT 25673 Query 293267 TCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACA 293325 |||| |||||| ||| || |||| | | | ||||| || | || | | ||| || Sbjct 25674 TCATCGTCTCGTTCCACAGACCCA-GCTCGACCAGCTCACGCAGCAGCCACGGGTTCACG 25732 Query 293326 ACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTT 293366 || ||||||| || ||||| || || |||||||||| Sbjct 25733 ACTTGGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTT 25773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835996681301