Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq33 136 9e-27 seq27 114 3e-20 seq59 113 1e-19 >seq33 Length=1115382 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || || |||| ||||| || || ||||| || |||||| ||| ||||| ||||| Sbjct 831275 AAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTC 831334 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || ||||| || ||||||||||| || || || || || || Sbjct 831335 CTCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 831394 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 |||||| || || ||||| || || || | || || || || |||||||||||||| Sbjct 831395 CTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGT 831454 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||||||||||||||| || ||||| Sbjct 831455 CTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487 >seq27 Length=46380 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || || |||| ||||| || || ||||| || |||||| Sbjct 99 CCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 158 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || || ||||||| || ||||| || Sbjct 159 AGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGA 218 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || ||||| || || || | || || || || Sbjct 219 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACC 278 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||||||||| || || || ||||| ||||| || ||||| ||| Sbjct 279 TCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATGATG 329 >seq59 Length=643831 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || || || ||||| || |||||| Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| |||||||| || Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | ||| || || || Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401289 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||||||||| || ||||||||||| | ||||| Sbjct 401288 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242 Score = 104 bits (114), Expect = 6e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||||| || || | ||||||||||||||||| |||||||| | Sbjct 499053 CCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTG 499112 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| |||| || ||||| || |||||||||||||||||| || Sbjct 499113 AGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGA 499172 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| || || || || || || ||||| || Sbjct 499173 ATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653478026358