Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq22 114 3e-20 >seq22 Length=1423774 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 334187 || || |||||||| ||||| || ||||| || || | | || | || ||||| Sbjct 408602 TCCGAACCGTCGAGGTCGTGCTCGACGTACCAGGTCTTGACCTCCTCAGGCGACGGGAAG 408661 Query 334188 CCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGC 334247 || || | |||||||||| || |||||||| || || || ||||||| || || | Sbjct 408662 CCCTCCACCTGACCGTTCTGGATGGCGCGCATAAGGGTCGACTTACCCGAACCATTACGA 408721 Query 334248 CCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTA---TTGTTCAGAAGA 334304 ||||| ||||||||||||| |||||||| ||| | | ||| ||||||| ||| Sbjct 408722 CCACAGAGACCGTAGCGGTGGCCACGCTTGAGA---CGCAGGGTAGCGGTGTTCAGCAGA 408778 Query 334305 ATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || |||| || || || || || | ||| | |||||| |||||||| Sbjct 408779 ATCTTAGCACCGTAGGCGAGCGAGAACTGACAGTTACACAGGTCCTCACC 408828 Score = 98.7 bits (108), Expect = 2e-15 Identities = 284/425 (67%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC-TGCAATCTCGAACCGAACTG 297495 |||||||| || || ||||| ||| ||||||||| ||| | | | | || ||| ||||| Sbjct 277025 GTGAAAATGTAACGCGCACTGGCGGCATCCTTACCGCCCATACTA-CGCGTACCAAACTG 277083 Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555 || | |||| | | ||| | ||| ||||| || ||| ||||| || | || Sbjct 277084 ACCATTCGGCGAGAGAAGGTTCACGTTGTTGCTACCACAATAGTCCTGCGCCAACCCGAC 277143 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 || ||| || ||| || ||||||||||| || || | || || | |||||| Sbjct 277144 AATCGTCA--TGACCAGACTCTGGTCGCCATGGTGGTACGCCGTGTGTTCCGAGACGTAA 277201 Query 297614 CCGCTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATAT 297672 || | ||| ||| ||||| | || ||| ||||||||||||||||| | ||| | Sbjct 277202 CCTTGCAGCTGCTGC-ACCTTGATTTCCGTCTTCAAATTGCGCTTGAAACATCCATACAG 277260 Query 297673 CACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATC 297732 |||||| || ||| || |||| |||||| || | ||||| || | | Sbjct 277261 CACTTTGCGCTGACCCGGCTTGAGACCATCCACCATACTGGGAATCGAGCG---AATGTT 277317 Query 297733 GTACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGG 297788 || ||| |||||||| ||| | ||||||| ||| ||||| | || ||| | || | Sbjct 277318 GT-CCGCCATCGAGAACAGAATCAACTCCTTGTTGATAAAGTCAGAAATGGGGATCTGGC 277376 Query 297789 GCTTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCC 297847 | || |||||| | | | || ||| || | ||||| || ||||||||| || || Sbjct 277377 GGATCCGGTGGTCCAAGTACGTGCCAGGTACGAACTGCCG-CAGCCACTCCTTTCGGTCG 277435 Query 297848 TCGGC 297852 || || Sbjct 277436 TCCGC 277440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879138030350