Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq23 205 9e-48 seq33 125 7e-24 seq27 118 1e-21 seq59 109 5e-19 >seq23 Length=193243 Score = 205 bits (226), Expect = 9e-48 Identities = 947/1466 (65%), Gaps = 59/1466 (4%) Strand=Plus/Plus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||| || ||||| |||||||| || | ||| || | || || | ||||| ||| Sbjct 25722 ACGGGTTCACGACTTGGAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTCGTGT 25781 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| | |||||| ||| || || || ||| | || |||||||| || Sbjct 25782 ACGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGACGCAGTCGGCATCGGCG 25841 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 | | | || || |||||||||||| | ||| | | |||| | | || ||| | Sbjct 25842 AAAGGAGAAGCGAGTTGCGCAAGCCGTGCTTTGCAATCTTGGCCTTGAGCTCCGTCCAGT 25901 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG--TAACACTCCTCGACTGGC 153262 ||||||| | | ||| ||| |||||||||||||||||| || || | ||| ||| Sbjct 25902 CCCACAGGTCGGTCGGCGTCTTGTTCCACATGTCGTACTGCAGAATACCCTGCGA--GGC 25959 Query 153263 GGGACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGC-C 153320 || ||||| | |||| ||| |||||| | || ||||| || || | ||| | Sbjct 25960 AGGGCTGCCCTCGTACGTCTCGTACGTGCCGTACTCG-GCCGCCAGCTCACA-CGAGCGC 26017 Query 153321 TCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAG--AACGGCCGCTTCTT 153378 || ||||| | | ||| || || || ||| || | ||||| ||| ||| || | Sbjct 26018 TCCAGCGCAGCGTGGTAGATCGTCTCAAAGATCTGGATGTTGAGCTGACG--CGCCTCCT 26075 Query 153379 CGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGC 153438 ||| ||| | || || || | || || || || ||||| ||||||| ||||| | Sbjct 26076 GGCTGTCGAAGGGGTAGCCCATAATCATGAACGCATCCGCCAGGCCCTGGACACCGATAC 26135 Query 153439 CGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 |||| || ||||| | ||| ||| | || | | | ||||||| ||| | Sbjct 26136 CGATCGGGCGATGGCGCATGTTCGAGCGGCGTGCCGACTCGACAGGATAGTAGTTGATGT 26195 Query 153499 CGATAATTTTGTTGAGGTT-GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAA 153557 | ||||| ||| ||||| ||| ||| || || | | | | || || ||| Sbjct 26196 CAATAATGCGGTTCAGGTTCTTGCA-CACGACCTTCGCCACGTCGTGCAGGCGCTGGAAG 26254 Query 153558 TCATAGGTCATTTCGTCG-ACGCGTACGCATCGATTCACG--------GCAATAGACGCC 153608 | ||| | |||| | || || | | || || ||| ||||| || ||| Sbjct 26255 TTGTAG--CGCTTCGAGGCACCAGTGC-CCTCAATGAACGTCGGGAGCGCAATCGAGGCC 26311 Query 153609 AGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTG 153668 || || || ||||||||||| |||| || ||||| | ||||| | ||| ||||| Sbjct 26312 AGGTTGCACACGGCCGTCTCATCGGGCGAGCAGTACTCGATAATCTCCGTGCACAGGTTC 26371 Query 153669 CTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATT-GCACGCGTCTTTGAA 153727 || || || ||| | || | || ||||| ||||| || ||| || || ||| | Sbjct 26372 GAGCTCTTGATCGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCA-GCATCCTTGTA 26430 Query 153728 GAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCT 153786 || ||| |||| ||| ||||| || | |||| || | | || ||| | || Sbjct 26431 CAGAATGAACGGATTGCCCGTCTCCGTCTGTGCCTCGA-GAATAGCGTACCACAGCTTCT 26489 Query 153787 GCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAA 153846 |||| ||| | || | || || ||||||||||| |||||||| ||||| Sbjct 26490 GCGCCTTGACCTTACGACGGAAACGACCTTCGCTCTCGTACTTTTCGTACAGCTTCTCAA 26549 Query 153847 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACA 153906 |||| |||||||||||||| || ||||| || |||| || ||||| |||| |||| Sbjct 26550 ACTCCTCGCCGTAGCAGTCCGCCAGGCCAGGGCACTCCGAAGGGCACATAAGCGCCCACT 26609 Query 153907 TATCG-TCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGG 153965 || || || | ||| || ||| |||||||| |||||||| ||||| | | | Sbjct 26610 CGCCGTTCTGC-TCGACACGCTTCATAAACAGATCTGGCACCCACAGCGCCAGGAAAATG 26668 Query 153966 TCGCGCGCCTTGCA-ATCCTCCGCGCC---CATGTTGCGTTTCAGATTGAGCACGCTATA 154021 || |||| | ||| || ||| ||| | ||||| ||| | || | | | Sbjct 26669 TCACGCG-CACGCACTTCGTCCTTGCCGTGGTTCTTGCG---CAGGTCGATAAACTCAAA 26724 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCC 154078 | || | |||||| || || | ||||| || | ||||| ||| || ||||| Sbjct 26725 CACATCCGGGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGGCGCTTGTTGCCGCC 26784 Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138 ||| || |||| ||| || | |||||||| || |||| ||| || | | ||| |||| Sbjct 26785 CTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGCACAATACCG-TTGC 26843 Query 154139 -GGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 ||||| || || | || | ||| |||||| | || | ||| | Sbjct 26844 TCACACCGTTCGTGCCGGA--AATATACGAGCCAGTGGCGCGGATGCAGTGGATGTTCAG 26901 Query 154196 GCCAATGCCGCC-GCCGTACTT--TGATATGGCAGCGCAGTCGCC--CAGCGTCCTGTAG 154250 ||||| || || ||||| ||| |||| || |||| | || ||||| ||| Sbjct 26902 ACCAATACCACCAGCCGT-CTTGCTGAT----CAACGCACACTCCTTGAGCGTGTCGTAA 26956 Query 154251 ATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG 154310 ||||| || || ||||| | || | | ||| ||||| |||| ||||| | Sbjct 26957 ATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTGCGGGTTC 27016 Query 154311 CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATG 154370 |||| ||||| || || || ||| || ||||||||| || | | ||| | Sbjct 27017 GGCGTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGACATGTAG 27076 Query 154371 CGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATG 154430 |||||| || || ||| || | || |||||||||||||| | || || |||||| Sbjct 27077 TTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTACAGCCACACGCATG 27136 Query 154431 AGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||| || || ||||| Sbjct 27137 AGCATGTGCTGCGGTCGCTCAGCGAC 27162 Score = 167 bits (184), Expect = 2e-36 Identities = 309/450 (69%), Gaps = 15/450 (3%) Strand=Plus/Plus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| | ||||| || ||| || |||||| | || || || ||| ||||| | Sbjct 41737 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCG 41796 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATA 52514 ||||| | | || | | || | ||||| || ||| ||||| |||||| | || Sbjct 41797 ATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATT 41856 Query 52515 TCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACC 52574 | || ||||| || |||||||| |||||||||||| | | || || ||| Sbjct 41857 ACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTCA--------GTCACC 41908 Query 52575 -GAAAAA----TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCG 52629 ||| || | | | | |||||| || |||| | | ||||| || | |||| Sbjct 41909 TGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCG 41968 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-C 52688 | ||||| ||||| |||| || ||||| || ||| | |||||||| || | ||| | Sbjct 41969 AGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTC-GTCTC 42027 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAG 52748 |||||| ||||||| ||||||||||| || |||||| |||| ||||| | || ||| Sbjct 42028 ATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCGAAG 42087 Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808 ||| | || | ||||| ||||| |||||| | ||||| ||||| |||||||| | Sbjct 42088 CACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCG 42147 Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 |||||||||||| || || | ||| ||| Sbjct 42148 AACTTTTTCGAGCGTCGTGTGGCCGACTAT 42177 >seq33 Length=1115382 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||| | || || |||||| || || ||||| | | Sbjct 831296 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 831355 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || |||||||||||||||||||| ||||| || ||||| ||| || || | ||| Sbjct 831356 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 831415 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||| ||||||| ||| | ||| || ||||||||||| || | Sbjct 831416 G-TCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGA 831474 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 831475 CGAAGATTTGCATGGC 831490 >seq27 Length=46380 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||| ||| ||||| | || ||||| | | | Sbjct 134 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAA 193 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | || |||||||||||||| |||||||| ||||| ||| || || | ||| Sbjct 194 GATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 253 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||||||||| | || | ||| || ||||| || || || | Sbjct 254 G-TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAA 312 Query 138602 CAAAAATCTGCATG 138615 | ||||| |||||| Sbjct 313 CGAAAATTTGCATG 326 >seq59 Length=643831 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || ||||| | Sbjct 401435 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCG 401376 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| ||||| || ||||| ||| || || | Sbjct 401375 AAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACA 401316 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||||||||| | || | ||| || || || || || || Sbjct 401315 TTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTG 401256 Query 138601 ACAAAAATCTGCATGGCT 138618 || || | ||||| ||| Sbjct 401255 ACGAACACTTGCATAGCT 401238 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 || ||||| ||||| ||||| || | |||||| |||||| || || || |||| | || Sbjct 499089 TCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAG 499148 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 || ||||||||||| |||||||| || || || ||||| ||| | |||| ||| Sbjct 499149 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTC-TTGAATCTTTGCTTT 499201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262021599920