Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq23 131 2e-25 seq59 111 1e-19 seq33 95.1 1e-14 >seq23 Length=193243 Score = 131 bits (144), Expect = 2e-25 Identities = 357/541 (66%), Gaps = 17/541 (3%) Strand=Plus/Plus Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGC-GCAGAAAGGCCGAGTGGGCCATGAA 47104 || || |||| | |||||| ||| ||| ||| |||||| ||||||||||||| | Sbjct 41647 CTGTTCAACGCTATCGAGACCATTCCCGTTGTGAAGCAGAA-GGCCGAGTGGGCCCTTCG 41705 Query 47105 GTACATTGAAAACGAAAACGTCACTC--TGGCCGAACGTTTGATCGCTTTCGCCATCGTC 47162 | |||| || || ||| ||| | | || || | | || || ||| ||| Sbjct 41706 CTGGATTGCGGAC--AAGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTG 41763 Query 47163 GAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTT 47222 |||||| |||||||||||||| |||||| |||| || | |||| | || | Sbjct 41764 GAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTC 41823 Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 ||||| || || |||| |||||||| || | | ||||| || ||||||||| || Sbjct 41824 ATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGAC 41883 Query 47283 TTTGCCTGTCTCTACTACAA-CACTAGAGTCGATCAAAAG---TTGGACGTGCCCACCGT 47338 ||||| || | | || ||| || | ||| | | || ||| || Sbjct 41884 TTTGCGTGCTTGCTGTTCAGTCACCTGA-------AGAAGCGCTCGCACCCTGACACGGT 41936 Query 47339 CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCC 47398 || | ||| || |||| || ||| | || |||| ||| ||||| | ||||||||||| Sbjct 41937 CAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCC 41996 Query 47399 CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGA 47458 | || | | || ||||| || | ||| | ||||||| || ||||| ||||| Sbjct 41997 TGTGTCGCTTATCGGCATGAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGA 42056 Query 47459 CCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTT 47518 ||| ||||| || || | || ||| |||||| | ||||||||| || || Sbjct 42057 CCGTCTGCTGGTCGCTCTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTT 42116 Query 47519 TATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||| | ||||| ||||| |||||||| | |||||||||||| || || | ||| || Sbjct 42117 TATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTGTGGCCGACTA 42176 Query 47579 T 47579 | Sbjct 42177 T 42177 Score = 102 bits (112), Expect = 8e-17 Identities = 211/308 (69%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 147247 ATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCAT 147306 ||||| || |||| | | || | ||| ||||| || || ||| ||||| ||||| Sbjct 26927 ATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCAC 26986 Query 147307 TGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTG 147366 ||||| ||||| |||| || || ||| ||||| |||||||| || | Sbjct 26987 ACAAGGAAGCACGACGACATCTGCGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAG 27046 Query 147367 GCGTGCGTGAACG--TGCCCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGT 147424 || ||||| |||| | | | ||| | | ||| ||||| ||||| |||||| |||| Sbjct 27047 GCATGCGTAAACGCCTTCTCGGACATGT-AGTTG-TACGTCTCAATAGCGCTCTCCACGT 27104 Query 147425 CATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCA 147484 | |||||||||||| | | || || ||||||||||||||||| ||||| || || | | Sbjct 27105 CCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCT 27164 Query 147485 CGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACCAAAGTACTTGTAG 147543 | | |||| | || || | | | | ||| || ||||| |||||| | |||||| Sbjct 27165 TGCCGTTGATGCGCAGAAGGTA-CGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAG 27223 Query 147544 TCGTAGTC 147551 | | |||| Sbjct 27224 TGGAAGTC 27231 >seq59 Length=643831 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||||| || | || ||||| || || || ||||| ||| Sbjct 401471 GCACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 401412 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||| ||| || ||||| || |||||| |||||| ||||| || || ||| Sbjct 401411 CTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGA 401352 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 401351 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 401292 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || | ||| | ||| || ||||| || || || || || | ||||| ||| Sbjct 401291 ACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCT 401238 >seq33 Length=1115382 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | ||||| || || ||||| || |||||| | Sbjct 831296 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 831355 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 || | ||||| || || ||||| || |||||||||||| ||| || ||| | | Sbjct 831356 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 831415 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| ||| || |||| || | ||| ||||| |||||||| || || Sbjct 831416 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 831475 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 831476 GAAGATTTGCATGGC 831490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500437430640