Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq23 131 2e-25
seq59 111 1e-19
seq33 95.1 1e-14
>seq23
Length=193243
Score = 131 bits (144), Expect = 2e-25
Identities = 357/541 (66%), Gaps = 17/541 (3%)
Strand=Plus/Plus
Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGC-GCAGAAAGGCCGAGTGGGCCATGAA 47104
|| || |||| | |||||| ||| ||| ||| |||||| ||||||||||||| |
Sbjct 41647 CTGTTCAACGCTATCGAGACCATTCCCGTTGTGAAGCAGAA-GGCCGAGTGGGCCCTTCG 41705
Query 47105 GTACATTGAAAACGAAAACGTCACTC--TGGCCGAACGTTTGATCGCTTTCGCCATCGTC 47162
| |||| || || ||| ||| | | || || | | || || ||| |||
Sbjct 41706 CTGGATTGCGGAC--AAGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTG 41763
Query 47163 GAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTT 47222
|||||| |||||||||||||| |||||| |||| || | |||| | || |
Sbjct 41764 GAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTC 41823
Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282
||||| || || |||| |||||||| || | | ||||| || ||||||||| ||
Sbjct 41824 ATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGAC 41883
Query 47283 TTTGCCTGTCTCTACTACAA-CACTAGAGTCGATCAAAAG---TTGGACGTGCCCACCGT 47338
||||| || | | || ||| || | ||| | | || ||| ||
Sbjct 41884 TTTGCGTGCTTGCTGTTCAGTCACCTGA-------AGAAGCGCTCGCACCCTGACACGGT 41936
Query 47339 CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCC 47398
|| | ||| || |||| || ||| | || |||| ||| ||||| | |||||||||||
Sbjct 41937 CAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCC 41996
Query 47399 CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGA 47458
| || | | || ||||| || | ||| | ||||||| || ||||| |||||
Sbjct 41997 TGTGTCGCTTATCGGCATGAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGA 42056
Query 47459 CCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTT 47518
||| ||||| || || | || ||| |||||| | ||||||||| || ||
Sbjct 42057 CCGTCTGCTGGTCGCTCTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTT 42116
Query 47519 TATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
|||| | ||||| ||||| |||||||| | |||||||||||| || || | ||| ||
Sbjct 42117 TATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTGTGGCCGACTA 42176
Query 47579 T 47579
|
Sbjct 42177 T 42177
Score = 102 bits (112), Expect = 8e-17
Identities = 211/308 (69%), Gaps = 6/308 (2%)
Strand=Plus/Plus
Query 147247 ATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCAT 147306
||||| || |||| | | || | ||| ||||| || || ||| ||||| |||||
Sbjct 26927 ATCAACGCACACTCCTTGAGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCAC 26986
Query 147307 TGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTG 147366
||||| ||||| |||| || || ||| ||||| |||||||| || |
Sbjct 26987 ACAAGGAAGCACGACGACATCTGCGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAG 27046
Query 147367 GCGTGCGTGAACG--TGCCCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGT 147424
|| ||||| |||| | | | ||| | | ||| ||||| ||||| |||||| ||||
Sbjct 27047 GCATGCGTAAACGCCTTCTCGGACATGT-AGTTG-TACGTCTCAATAGCGCTCTCCACGT 27104
Query 147425 CATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCA 147484
| |||||||||||| | | || || ||||||||||||||||| ||||| || || | |
Sbjct 27105 CCTCGCCGTGAATGCCTACAGCCACACGCATGAGCATGTGCTGCGGTCGCTCAGCGACCT 27164
Query 147485 CGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACCAAAGTACTTGTAG 147543
| | |||| | || || | | | | ||| || ||||| |||||| | ||||||
Sbjct 27165 TGCCGTTGATGCGCAGAAGGTA-CGAGCGTTCCAGCGTCTTGAAGCCAAAGAAGTTGTAG 27223
Query 147544 TCGTAGTC 147551
| | ||||
Sbjct 27224 TGGAAGTC 27231
>seq59
Length=643831
Score = 111 bits (122), Expect = 1e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | |||| ||||| || | || ||||| || || || ||||| |||
Sbjct 401471 GCACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 401412
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || ||||| ||| || ||||| || |||||| |||||| ||||| || || |||
Sbjct 401411 CTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGA 401352
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || |||||||||||| ||| || ||| | | |||| ||||| | | |||
Sbjct 401351 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 401292
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || | ||| | ||| || ||||| || || || || || | ||||| |||
Sbjct 401291 ACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCT 401238
>seq33
Length=1115382
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || ||||| |||| | ||||| || || ||||| || |||||| |
Sbjct 831296 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 831355
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041
|| | ||||| || || ||||| || |||||||||||| ||| || ||| | |
Sbjct 831356 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 831415
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| ||||||| ||| || |||| || | ||| ||||| |||||||| || ||
Sbjct 831416 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 831475
Query 127102 AAAAATCTGCATGGC 127116
|| || ||||||||
Sbjct 831476 GAAGATTTGCATGGC 831490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500437430640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |