Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq23 102 7e-17
seq27 87.8 2e-12
seq59 82.4 7e-11
>seq23
Length=193243
Score = 102 bits (112), Expect = 7e-17
Identities = 180/260 (69%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116
||||| ||||||| | |||| ||||||||| || | |||||| ||||||||||||
Sbjct 25991 ACGGCACGTACGAGACGTACGAGGGCAGCCCTGCCTCGCAGGGTATTCTGCAGTACGACA 25932
Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGA-GCGTTTTAAAACAACGCATATCG 124175
||||||| || ||||| | |||||||||||| | | || | | | || |
Sbjct 25931 TGTGGAACAAGACGCCGACCGACCTGTGGGACTGGACGGAGCTCAAGGCCAAG-ATTGCA 25873
Query 124176 ACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAA 124235
| |||||| ||||| |||||||| | | || |||||||| || | || ||
Sbjct 25872 AAGCACGGCTTGCGCAACTCGCTTCTCCTTTCGCCGATGCCGACTGCGTCGACGAGCCAG 25813
Query 124236 ATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTG 124295
|| | || ||||| | ||| ||||||| ||| | ||| | ||| |||| || |||
Sbjct 25812 ATCCTTGGCTTTAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTG 25753
Query 124296 TTAGCCGGCGATTTTCAAGT 124315
| |||||||| || |||||
Sbjct 25752 CTCGCCGGCGAGTTCCAAGT 25733
>seq27
Length=46380
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || ||| ||||| || || || || |
Sbjct 135 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAG 194
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||| ||||| |||||||| ||||| ||||| || || || || || || |
Sbjct 195 ATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTG 254
Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329
|| | ||||| |||||||| || || || || | ||| ||||| || || || || ||
Sbjct 255 TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACG 314
Query 45330 AAAATTTGCAT 45340
|||||||||||
Sbjct 315 AAAATTTGCAT 325
>seq59
Length=643831
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || ||| || || || || || ||||| ||||| || || |||||
Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| || | || || || ||| | |||| || || |||||||| |||
Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| || || || || || || || || | || | |||||||||||||| ||
Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401289
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || | ||| || ||||| || || || || || | |||||| ||
Sbjct 401288 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGC 401239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002855347560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |