Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq23 102 7e-17 seq27 87.8 2e-12 seq59 82.4 7e-11 >seq23 Length=193243 Score = 102 bits (112), Expect = 7e-17 Identities = 180/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116 ||||| ||||||| | |||| ||||||||| || | |||||| |||||||||||| Sbjct 25991 ACGGCACGTACGAGACGTACGAGGGCAGCCCTGCCTCGCAGGGTATTCTGCAGTACGACA 25932 Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGA-GCGTTTTAAAACAACGCATATCG 124175 ||||||| || ||||| | |||||||||||| | | || | | | || | Sbjct 25931 TGTGGAACAAGACGCCGACCGACCTGTGGGACTGGACGGAGCTCAAGGCCAAG-ATTGCA 25873 Query 124176 ACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAA 124235 | |||||| ||||| |||||||| | | || |||||||| || | || || Sbjct 25872 AAGCACGGCTTGCGCAACTCGCTTCTCCTTTCGCCGATGCCGACTGCGTCGACGAGCCAG 25813 Query 124236 ATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTG 124295 || | || ||||| | ||| ||||||| ||| | ||| | ||| |||| || ||| Sbjct 25812 ATCCTTGGCTTTAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTG 25753 Query 124296 TTAGCCGGCGATTTTCAAGT 124315 | |||||||| || ||||| Sbjct 25752 CTCGCCGGCGAGTTCCAAGT 25733 >seq27 Length=46380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | || ||| ||||| || || || || | Sbjct 135 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAG 194 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| ||||| |||||||| ||||| ||||| || || || || || || | Sbjct 195 ATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTG 254 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| |||||||| || || || || | ||| ||||| || || || || || Sbjct 255 TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACG 314 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 315 AAAATTTGCAT 325 >seq59 Length=643831 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || | || ||| || || || || || ||||| ||||| || || ||||| Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | |||| || || |||||||| ||| Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || || || | || | |||||||||||||| || Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401289 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || | ||| || ||||| || || || || || | |||||| || Sbjct 401288 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGC 401239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002855347560