Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq23 167 4e-36 >seq23 Length=193243 Score = 167 bits (184), Expect = 4e-36 Identities = 505/767 (66%), Gaps = 16/767 (2%) Strand=Plus/Plus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 |||||||||||| || || | | | ||||| | | | ||| ||||| |||||||||| Sbjct 25384 CACCGTGAACTGGATCGCATCCGCAGCAGGACGCGTGCGCAGGTAGTAGCTGCCGGTCTT 25443 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTG-CTCACGTTGGGGTCGG 203963 || ||||||| ||| ||||| | |||||| || | || | | | |||| || | | Sbjct 25444 GAGACCCTTCTTCCAGCCGTAGAAGTGCATCGACGTAAGCTGGCCGAACGTCGGCG-AGC 25502 Query 203964 CCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATAT 204023 || ||| ||||||| |||||| ||| |||||| | | || || || | ||| | Sbjct 25503 TCAGGTGGATGTTCAAGCTCTGGCTCTGGCAGATGAACGCACCACGGTCCGCCGACATGT 25562 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGA 204082 ||||||| |||||| |||||||||||| |||||| ||| || || || |||| | Sbjct 25563 CGATAATGACCTTCTGGCTAATCTCCCACACGGTCTTGTACAGCGCCT-TGATGTGGTCG 25621 Query 204083 GGCACATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 || | | || |||| | |||||||||| || || || | | | | || | Sbjct 25622 GGAA----TGCCAGGGACGTTTTGGATCGAGCCGCCGTGCGCAATGATGCGCTGCTTCAT 25677 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 | ||| ||||| |||| | || |||||| |||| ||| ||||| | || || Sbjct 25678 CGTCTCGTTCCACAGACCCAGCTCGACCAGCTCACGCAGCAGCCACGGGTTCACGACTTG 25737 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 || || |||| ||||| | || || | | |||| | ||| | || || || ||| Sbjct 25738 GAACTCGCCGGCGAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTC 25797 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 ||| ||| | ||||| || || || ||||| || | ||||| || ||||| Sbjct 25798 GTTAAAGCCAAGGATCTGGCTCGTCGACGCAGTCGGCATCGGCGAAAGGAGAAGCGAGTT 25857 Query 204319 GCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGG 204378 ||||| |||| ||| | | || ||| || |||||||| || | | || Sbjct 25858 GCGCAAGCCGTGCTTTGCAATCTTGGCCTTGAGCTCCGTCCAGTCCCACAGGTCGGTCGG 25917 Query 204379 TTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGT 204438 || | |||||||||| |||| | || || || | | |||||||||| |||||| Sbjct 25918 CGTCTTGTTCCACATGTCGTACTGCAGAATACCCTGCGAGGCAGGGCTGCCCTCGTACGT 25977 Query 204439 CGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACA 204497 | || | || | | ||| | ||||||| |||||| ||| || | ||| | Sbjct 25978 CTCGTACGTGCCG-TACTCGGCCGCCAGCTCACACGAGCGCTCCAGCGCAGCGTGGTAGA 26036 Query 204498 TGGTCTCAAAGATCTGAACGTTTAATCTGGCG-GCCTCCGTTCCGTCAAACGCCAGACCC 204556 | |||||||||||||| | | || | ||| || |||||| | ||| || | ||| Sbjct 26037 TCGTCTCAAAGATCTGGATG-TTGAGCTGACGCGCCTCCTGGCTGTCGAAGGGGTAGCCC 26095 Query 204557 AGCATGGCAAACACGTCCGCCAAGCCCTGCACTCCGATTCCCAACGG 204603 | || ||| | ||||||| |||||| || ||||| || | ||| Sbjct 26096 ATAATCATGAACGCATCCGCCAGGCCCTGGACACCGATACCGATCGG 26142 Score = 150 bits (166), Expect = 3e-31 Identities = 293/430 (68%), Gaps = 11/430 (3%) Strand=Plus/Minus Query 159652 CTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTCTT 159711 |||||||||||| | |||||||| || || || ||||| || | ||||| ||| | Sbjct 42159 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGT 42100 Query 159712 CACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCGAT 159771 | ||| ||| ||||||| |||||||| |||||| | ||| |||||||| || || Sbjct 42099 CGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACAAACTCAAT 42040 Query 159772 GTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAG 159831 ||| ||||| | | || || || | ||| || || || || |||| || Sbjct 42039 GTACTGGCACATGAGACGAGCATTCATGCCGATAAGCGACACAGGCAGAGCCTCCGTCAA 41980 Query 159832 AAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGT-TC---GTACC 159887 ||| |||||||| ||| ||| || ||||| | || | ||| ||| || || | Sbjct 41979 AAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGAC-CGTGTCAGGGTGCG 41921 Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947 |||| || ||| | ||||| | ||||||||||||| |||||| |||| Sbjct 41920 AGCGCTTCTTCA------GGTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCT 41867 Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007 |||| || | || | |||||| || | || |||||||||| |||||| || | Sbjct 41866 CGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCA 41807 Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067 |||| || || | |||||| | || || ||||| ||||||||||| |||||||||| Sbjct 41806 GCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCA 41747 Query 160068 CGAGCCTCTC 160077 | || | ||| Sbjct 41746 CAAGGCGCTC 41737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154593694160