Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq59 127 5e-24
seq27 125 2e-23
seq33 120 7e-22
seq60 96.9 8e-15
>seq59
Length=643831
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || ||||| |||||||||||||| |||| ||||||||| || ||
Sbjct 401462 CGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTG 401403
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || |||||||| || ||||| ||||||||| ||| ||
Sbjct 401402 CGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCC 401343
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| |||||| |||| ||||| | | || || || |
Sbjct 401342 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGG 401283
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || || || | |||
Sbjct 401282 GTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTG 401245
Score = 87.8 bits (96), Expect = 4e-12
Identities = 106/143 (74%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||| || ||||| || || || ||||||| ||| |||||| | ||
Sbjct 499059 CGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGTA 499118
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||||||||| ||||| |||||||| || |||||| ||||||
Sbjct 499119 CGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCCC 499178
Query 199529 TCTCGCTCCTGAATCTTTTGCTT 199551
|| || |||||| |||||||
Sbjct 499179 TCCTTGTCTTGAATC-TTTGCTT 499200
>seq27
Length=46380
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| ||||| |||||| |||| ||||||||| || ||| | |||||
Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || || ||||| | || || ||||||||| ||| ||||| |||
Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| ||||||| | || || |||| |||||||||
Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || ||||||||
Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTG 322
>seq33
Length=1115382
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| ||||| |||||| |||| ||||||||| | || | || ||
Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || ||||| ||||||||||| ||||||||| ||| || || |||
Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| ||||| | | || || || | ||||||||||
Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || || || |||||
Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTG 831484
>seq60
Length=383220
Score = 96.9 bits (106), Expect = 8e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| || || |||||| |||| ||||||||| || ||| | |||||
Sbjct 383046 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 383105
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || ||||| || |||||||| |||||||| ||| || || |||
Sbjct 383106 TCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCC 383165
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
|| ||||| ||| ||| || | ||||| | | ||| || ||||| ||
Sbjct 383166 TGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGT 383218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920678599087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |