Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq59 127 5e-24 seq27 125 2e-23 seq33 120 7e-22 seq60 96.9 8e-15 >seq59 Length=643831 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| |||||||||||||| |||| ||||||||| || || Sbjct 401462 CGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTG 401403 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| || ||||| ||||||||| ||| || Sbjct 401402 CGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCC 401343 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| ||||| | | || || || | Sbjct 401342 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGG 401283 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || || || || | ||| Sbjct 401282 GTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTG 401245 Score = 87.8 bits (96), Expect = 4e-12 Identities = 106/143 (74%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || ||||| || || || ||||||| ||| |||||| | || Sbjct 499059 CGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGTA 499118 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||||||||| ||||| |||||||| || |||||| |||||| Sbjct 499119 CGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCCC 499178 Query 199529 TCTCGCTCCTGAATCTTTTGCTT 199551 || || |||||| ||||||| Sbjct 499179 TCCTTGTCTTGAATC-TTTGCTT 499200 >seq27 Length=46380 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| |||||| |||| ||||||||| || ||| | ||||| Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || ||||| | || || ||||||||| ||| ||||| ||| Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||||| | || || |||| ||||||||| Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || |||||||| Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTG 322 >seq33 Length=1115382 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| |||||| |||| ||||||||| | || | || || Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| ||||||||||| ||||||||| ||| || || ||| Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| ||||| | | || || || | |||||||||| Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTG 831484 >seq60 Length=383220 Score = 96.9 bits (106), Expect = 8e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||| |||| ||||||||| || ||| | ||||| Sbjct 383046 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 383105 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || ||||| || |||||||| |||||||| ||| || || ||| Sbjct 383106 TCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCC 383165 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| ||| ||| || | ||||| | | ||| || ||||| || Sbjct 383166 TGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGT 383218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920678599087