Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq23 343 1e-89 seq33 143 3e-29 seq59 127 2e-24 seq60 107 2e-18 seq27 107 2e-18 >seq23 Length=193243 Score = 343 bits (380), Expect = 1e-89 Identities = 609/877 (69%), Gaps = 17/877 (2%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| || || ||| | |||||| || || || || | Sbjct 42159 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGT 42100 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | || ||||||||| | |||||| || |||| ||||| | ||||||||| ||||| Sbjct 42099 CGAGTGGTAGTGCTTCGGGTTGCCGAG-AG--CGACCAGCAGACGGTCGGCCACAAACTC 42043 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | ||| | | | || | || ||| ||||| || || | Sbjct 42042 AATGTACTGGCACATGAGACGAGCATTCATG-CCGATAAGCGACACAGGCAGAGCCTCCG 41984 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | | |||| | |||||| | ||| || ||||| | ||| | || || | | | Sbjct 41983 TCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGAC-CGTGTCAGGG 41925 Query 132863 T-CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 | || || | | || || |||||| |||||| ||||||||| |||| |||||| Sbjct 41924 TGCGAGCGCTTCTTCAGGTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCG 41865 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || ||| || ||||| ||| | || || |||||||| || || || || ||| Sbjct 41864 TCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCAGC 41805 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || || | || || |||||| ||||||| |||||| ||||| || || ||||| Sbjct 41804 CAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACA 41745 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 |||||||| ||||| ||| ||| || |||||||| || ||||| |||||||| Sbjct 41744 AGGCGCTCCGAGAACGAGGCACGCTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTC 41685 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC--CGAGG 133159 | || || || || || ||||| ||||| |||| | | | | || | || | Sbjct 41684 TGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAG--GTACTCGCGCTGCGCCGTGT 41627 Query 133160 AACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219 || | ||| ||||||||||| ||| || | |||||||| | ||||||||| | Sbjct 41626 CGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAA 41567 Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGA 133279 | || || ||||| ||||| || ||||| ||||||||||||| | ||||||||| | Sbjct 41566 TCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCA 41507 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 ||| || ||||| || || ||||| |||||||| || || || ||| | | | Sbjct 41506 ACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAA 41447 Query 133340 AATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | || |||||||||||||||| ||| ||||||||| || |||||| ||||| || | Sbjct 41446 AGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGA 41387 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAAT 133456 ||||||| ||||||| ||||| ||||| || || |||||||| ||| || || | Sbjct 41386 CCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGT 41327 Query 133457 ATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 | | || || || | |||||| ||||| |||||| Sbjct 41326 AGCGGATCGGGAACAGCACAAAGCGGCGCTTGTTTTC 41290 >seq33 Length=1115382 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| || ||| || | Sbjct 831487 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 831428 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 831427 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 831368 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| || || |||||||| |||| |||||||||| |||||||||| Sbjct 831367 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 831308 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || ||||||| || Sbjct 831307 ATCCAGAAGGAGAGC-ACTCTTCACCTGGTGCTTCG 831273 >seq59 Length=643831 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || ||||| || || || |||||| | || || ||| | || Sbjct 401242 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401301 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 401302 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401361 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 401362 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401421 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||| || || |||||||||| Sbjct 401422 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCG 401456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| ||| || | ||||| ||||||||||| | || |||||||| || || | || Sbjct 499201 AAAGCAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATCTTTGCC 499142 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 || || ||||| || |||| ||| || |||| ||||| ||||||||||| ||| || Sbjct 499141 GGAAAGCAGCTAGAGGACGGGCGTACACTCAGTGACTATAACATCCAAAAAGAAAGCACC 499082 Query 38442 CTGCATTTGGTGCTGCG 38458 ||||| |||| ||||| Sbjct 499081 CTGCACCTGGTACTGCG 499065 >seq60 Length=383220 Score = 107 bits (118), Expect = 2e-18 Identities = 113/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| ||||| | ||||||||||| || |||| ||| || || Sbjct 383173 AAGATCCAGGACAAGGAGGGCATTCCACCGGACCAACAGCGTCTTATTTTCGCTGGTAAG 383114 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCA 38446 |||||||| || | ||||| || | ||||||||||||||| ||||| ||| |||||||| Sbjct 383113 CAGCTGGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAAGGAGAGC-ACGCTGCA 383055 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGGCC 38472 | || || ||| || | || |||| Sbjct 383054 CCTTGTTCTCCGTCTGCGTGGTGGCC 383029 >seq27 Length=46380 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || |||||||| ||||| || |||||| | || || ||| | | Sbjct 325 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 266 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || || ||||| | |||||| Sbjct 265 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 206 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || || || ||| |||| || | |||||| || | |||||||||| Sbjct 205 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 146 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || |||| || ||| || | || || Sbjct 145 ATCCAGAAGGAGAGC-ACTCTTCACCTGGTTCTCCGTCTGCGCGGTGG 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172418618240