Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq59 107 1e-17
seq27 91.5 1e-12
seq60 86.0 4e-11
>seq59
Length=643831
Score = 107 bits (118), Expect = 1e-17
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || ||||| || || || || |||||||| | ||||| ||| || ||
Sbjct 499058 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 499117
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || || |||||||| ||||| || ||||| |||||||| |||||||||||
Sbjct 499118 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499177
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGAC 480697
|||||||||||||||||| ||||||
Sbjct 499178 CTCCTTGTCTTGAATCTTTGCTTTGAC 499204
>seq27
Length=46380
Score = 91.5 bits (100), Expect = 1e-12
Identities = 161/229 (70%), Gaps = 22/229 (10%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGT 480610
|| |||||||| || || ||||| || || || || | || || || ||| |||||
Sbjct 105 CGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGAGT 163
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || | ||||| |||||||| || | |||||||| || |||||||| ||
Sbjct 164 GCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACC 223
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAG-CTTCA-ATAGT--ATCAGTGTGTGAAG--- 480723
||||||||| || ||||| || ||||| || || ||| |||| |||||
Sbjct 224 TTCCTTGTCCTGGATCTT---------AGCCTTCACATTGTCGATC-GTGTCTGAAGACT 273
Query 480724 ---TTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||| || || || || ||||| |||||||||||||||||
Sbjct 274 CCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTG 322
>seq60
Length=383220
Score = 86.0 bits (94), Expect = 4e-11
Identities = 104/139 (75%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| |||||||| ||||| || || || || || || | || || || ||| ||||
Sbjct 383036 ACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGAG 383094
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | ||| || || ||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct 383095 TGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGC 383154
Query 480670 CTTCCTTGTCTTGAATCTT 480688
| |||||||| || |||||
Sbjct 383155 CCTCCTTGTCCTGGATCTT 383173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268176583414028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |