Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq23 174 2e-38
seq22 136 5e-27
>seq23
Length=193243
Score = 174 bits (192), Expect = 2e-38
Identities = 571/871 (66%), Gaps = 31/871 (4%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || || | ||||| ||||| || ||| | || |
Sbjct 27150 CCGCAGCACATGCTCATGCGTGTGGCTGTAGGCATTCACGGCGAGGACGTGGAGAGCGCT 27091
Query 75272 TTGGAGACATACGACAAGATGTCCCA--AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| || | |||||| | ||| ||| | || || | || || || |
Sbjct 27090 ATTGAGACGTACAACTACATGTCCGAGAAGGC--GTTTACGCATGCCTCTCCGACGCTGT 27033
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || ||||| || | ||||||||||| ||||||||| | || ||||| |
Sbjct 27032 TCAACGCGGGTACGCCGAACCCGCAGATGTCGTCGTGCTTCCTTGTGTGCATGAAGGACG 26973
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|||| || | || || || | || || | |||||||||| ||| ||| |||||
Sbjct 26972 ACTCGATTGAGGGCATTTACGACACGCTCAAGGAGTGTGCGTTGATCAGCAAGACGGCTG 26913
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| |||||||| || ||||||| | | |||| | || |||| || || |
Sbjct 26912 GTGGTATTGGTCTGAACATCCACTGCATCCGCGCCACTGGCTCGTATATTTCCGGCACGA 26853
Query 75510 ATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
| ||| | || | |||||| | |||||||| || || || ||| ||| ||||| ||
Sbjct 26852 ACGGTGTGAGCA-ACGGTATTGTGCCAATGCTGCGTGTGTTCAACAACACGGCGCGGTAC 26794
Query 75569 GTAAATCAAGCGGGGCGTCG-CAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATG 75621
|| | || ||||| | |||| | || | | ||| ||||| |||| || ||
Sbjct 26793 GTTGACCA----GGGCGGCAACAAGCGCCCTGGTGCGTTTGCGATCTACCTGGAGCCGTG 26738
Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT---GACGAAGAGGC 75678
||| | ||| | | ||||| | || | || ||||| || ||||||| |
Sbjct 26737 GCACCCGGATGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGACGAAGTGCG 26678
Query 75679 TCGGTGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736
| | || || || |||| | | |||||| | ||||| || || |||||||| ||
Sbjct 26677 TGCGCGT-GACAT----TTTCCTGGCGCTGTGGGTGCCAGATCTGTTTATGAAGCGTGTC 26623
Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCG 75796
||| || || | ||| | ||| | || || || || || || | |||
Sbjct 26622 GAGCAGAACGGCGAGTGGGCGCTTATGTGCCCTTCGGAGTGCCCTGGCCTGGCGGACTGC 26563
Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGC 75855
|| ||||||||||| || ||| |||||| || ||| || ||| | | |
Sbjct 26562 TACGGCGAGGAGTTTGAGAAGCTGTACGAAAAGTACGA-GAGCGAAGGTCGTTTCCGTCG 26504
Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914
| || | || ||| || | | ||| | ||||||||| | ||||||||||||| || |
Sbjct 26503 TAAGGT-CAAGGCGCAGAAGCTGTGGTACGCTATTCTCGAGGCACAGACGGAGACGGGCA 26445
Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974
|| | || || |||||||||||| ||| ||||| ||||||||||| | || |
Sbjct 26444 ATCCGTTCATTCTGTACAAGGATGCTGCGAACCGCAAGAGCAACCAAAAGAACCTCGGCA 26385
Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034
| ||||||||||| || || |||||||| ||| | |||||| ||||||||||
Sbjct 26384 CGATCAAGAGCTCGAACCTGTGCACGGAGATTATCGAGTACTGCTCGCCCGATGAGACGG 26325
Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCC 76065
| || ||||| |||| || || || || ||
Sbjct 26324 CCGTGTGCAACCTGGCCTCGATTGCGCTCCC 26294
Score = 120 bits (132), Expect = 4e-22
Identities = 126/163 (77%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||| ||| | ||||||||| | |||||||| |||||||| ||||||||||| || ||
Sbjct 41727 CTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTC 41786
Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185
|| |||| | || | ||| |||||||||| ||||||||||| || || | ||||| |
Sbjct 41787 GTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGA 41845
Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| || |||||| |||| || |||||||| ||| || |||||
Sbjct 41846 ACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGC 41888
>seq22
Length=1423774
Score = 136 bits (150), Expect = 5e-27
Identities = 301/444 (68%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 14342 CGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCT 14401
||||| ||| || ||||| ||||||||||||||| ||| | |||||| ||||||
Sbjct 277311 CGCTCGATTCCCAGTATGGTGGATGGTCTCAAGCCGGGTCAGCGCAAAGTGCTGTATGGA 277252
Query 14402 TGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCG 14461
|| ||| | ||| | ||| ||||| |||||| || ||| | || ||| ||
Sbjct 277251 TGTTTCAAGCGCAATTTGAAGACGGAAATCAAGGTGCAGCAGCTGCAAGGTTACGTCTCG 277192
Query 14462 GACAAGTCTGCGTACCACCATGGTGA--AGTATCCTTAGCGGACACGATTGTTAAGTTGG 14519
|| | | |||||||||||||| || || || | | |||||||| |||||
Sbjct 277191 GAACACACGGCGTACCACCATGGCGACCAGAGTC--TGGTCATGACGATTGTCGGGTTGG 277134
Query 14520 CAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTA 14579
| | ||||| ||| |||||| | |||||||| ||| |||||| |||||||
Sbjct 277133 CGCAGGACTATTGTGGTAGCAACAACGTGAACCTTCTCTCGCCGAATGGTCAGTTTGGTA 277074
Query 14580 CGCGTCTCATGGGTGGTAAGGATGCTTCTCAG-ACGAGGTACATTTTCACAAAACTTACC 14638
||||| ||||| ||||||||||| | ||| || | ||||||||||| | ||
Sbjct 277073 CGCGTAGTATGGGCGGTAAGGATGCCGC-CAGTGCGCGTTACATTTTCAC-GGCGGTGCC 277016
Query 14639 AAGGA-GGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGA 14697
| | | | |||||| | || |||| ||||| || | || ||||||||||||||
Sbjct 277015 ACGTATTACACGCAAGCTTTTCCATCCGAAAGATGATGCGTTGCTGAACTACTTGGACGA 276956
Query 14698 TGATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAA 14757
||||| | ||||| || || | ||| |||| | || || || ||||
Sbjct 276955 CGATGGCCAGAGTATTGAGCCGGAATGGTACGTGCCTGTCGTCCCGCAAGTGCTTTTGAA 276896
Query 14758 TGGAACCGAGGGTATCGGTACGGG 14781
|||| | |||||||| ||||||||
Sbjct 276895 TGGAGCGGAGGGTATTGGTACGGG 276872
Score = 98.7 bits (108), Expect = 1e-15
Identities = 223/333 (67%), Gaps = 2/333 (1%)
Strand=Plus/Minus
Query 13562 AAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTC 13621
||| |||| || |||||| ||| || ||| || ||| | || || | ||| |
Sbjct 278088 AAGCTGGAAGATGCGAACTGGGCCGGCACGAAACGCAGTGGCGAATGCACGTTGATTCTT 278029
Query 13622 ACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGAT 13681
||||||||||| |||||||| | || || || | || | || || |||||||||
Sbjct 278028 ACAGAGGGTGACTCGGCTAAGGCGCTTGCTGTCTCTGGCTTGAGTGAGGTCGGTCGTGAT 277969
Query 13682 CACTACGGTGTGTTCCCACTTCGCGGTAA-ATGTAAGAATGTTCGGGACGCTTCGGTGGC 13740
|||||||||||||||||| || ||||| ||| |||||| || || || ||| |
Sbjct 277968 GCCTACGGTGTGTTCCCACTGCGTGGTAAGCTGT-TGAATGTGCGAGAAGCCTCGCATGA 277910
Query 13741 ACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGG 13800
||| | | ||| |||| |||| | |||| |||| || ||||| || || ||
Sbjct 277909 TCAGATTATGAAGAACACGGAGATCAAGAACATCAAAGAGATTCTCGGTCTGCAGCATGG 277850
Query 13801 AAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGACAGATGC 13860
|||| || ||| || | || ||||| || | ||||||||||| ||
Sbjct 277849 CAAAGTGTATTCGTCTGTGGATGGTTTGCGATATGGCAGTTTGATGATTATGACGGACCA 277790
Query 13861 CGATAATGATGGTTCTCACATCAAGGGTCTCAT 13893
||| ||||| || ||||||||||| || ||
Sbjct 277789 GGATTTCGATGGCTCGCACATCAAGGGACTTAT 277757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569145115680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |