Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq23 174 2e-37 seq22 114 2e-19 seq33 100 5e-15 >seq23 Length=193243 Score = 174 bits (192), Expect = 2e-37 Identities = 188/249 (76%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||||||||| ||| |||| || |||||||||||||| | |||||||| || Sbjct 42192 GACACCAGCCTTGGCATAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAG 42133 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 |||||| |||||| | || || || | || ||||||||||| | ||||| Sbjct 42132 CGAGATGTTCTCCATAAAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAG 42073 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | | ||||| |||||||| || || |||||||||||||||||||| || ||||| Sbjct 42072 AGCGACCAGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCAT 42013 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 |||||| |||| ||| ||||| | ||| | | ||| || ||||||||| ||| ||||| Sbjct 42012 GCCGATAAGCGACACAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTC 41953 Query 794132 GATGATGAT 794140 | | ||||| Sbjct 41952 GGTAATGAT 41944 Score = 149 bits (164), Expect = 1e-29 Identities = 208/292 (71%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || || |||||||||| ||| || || || ||||| ||||||| ||||| Sbjct 26782 GCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCATTGGCACAATACCGTT 26841 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 | | | ||||| ||||| | | || | ||| | |||||| | ||| | | Sbjct 26842 GCTCACACCGTTCGTGCCGGAAATATACGAGCCAGTGGCGCGGATGCAGTGGATGTTCAG 26901 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 || || || || |||| |||| ||| | ||| |||| || ||||| ||||| ||||| Sbjct 26902 ACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTGAGCGTGTCGTAAATGCC 26961 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||| ||||||||| |||||||| || || ||||||||||| | |||||| || ||| Sbjct 26962 CTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGACATCTGCGGGTTCGGCGT 27021 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 || || ||||| ||||| || | || ||| ||| || | ||||||| Sbjct 27022 ACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAACGCCTTCTCGGACATG 27073 Score = 141 bits (156), Expect = 1e-27 Identities = 210/294 (71%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAA 794435 || || |||||||| || |||||||| ||||| ||||| | || |||| ||||||||| Sbjct 41834 AGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCG-ACGCAAACGAGCCCGAGAA 41776 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 ||||||||||| ||||||||||| | || || ||||| | || | |||| | | Sbjct 41775 GAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACG-----AGGCACGC 41721 Query 794496 TTTGTTG--ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553 || | ||||| | |||||||| ||||| | | |||| ||| | || ||| Sbjct 41720 TTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTCG 41661 Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 || ||| || |||| || || ||| ||| || ||| ||||||||||| ||| Sbjct 41660 ATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAGC 41601 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||| ||||| ||||| || || |||||||| || || |||||| Sbjct 41600 GAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAG 41547 Score = 136 bits (150), Expect = 6e-26 Identities = 179/243 (74%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | || || || || || |||| || | ||||||||| ||| || ||| Sbjct 41543 GCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCG 41484 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-G 796268 || |||||||| || || |||||| | | |||||||||||||| |||| | | | Sbjct 41483 TCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATG 41424 Query 796269 CGA--GACCCAGTGGACCGTGTCGG-CGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | |||||| | | ||| || | || ||||||||||| |||||||| || || Sbjct 41423 CGGTTGTCCCAGTCGTGCAAGTCCTTCGAC-AGATCGACCTCCTCAGCGGTCCAGAACGA 41365 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAA 796385 |||||| ||||| ||||||||| |||| ||| ||||||||||| |||||||| ||||| Sbjct 41364 GGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 41305 Query 796386 GCG 796388 ||| Sbjct 41304 GCG 41302 Score = 109 bits (120), Expect = 9e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 ||| || |||||||||||||||||||| | |||||| ||||||| | ||| || Sbjct 26023 CGCAGCGTGGTAGATCGTCTCAAAGATCTGGATGTTGAGCTGACGCGCCTCCTGGCTGTC 26082 Query 2070111 CCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGG 2070170 | || | |||| || ||||| || ||||||||||| || |||| || ||||| Sbjct 26083 GAAGGGGTAGCCCATAATCATGAACGCATCCGCCAGGCCCTGGACACCGATACCGATCGG 26142 Query 2070171 CCGGTGGCGCAGGTTCGAGTGCCGGGC---CTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 || ||||||| ||||||| | || || |||| || || |||| ||||||||| || Sbjct 26143 GCGATGGCGCATGTTCGAGCGGCGTGCCGACTCG---ACAGGATAGTAGTTGATGTCAAT 26199 Query 2070228 CACGCGGTTGAGGTT 2070242 | |||||| ||||| Sbjct 26200 AATGCGGTTCAGGTT 26214 Score = 91.5 bits (100), Expect = 2e-12 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 2071784 CGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC 2071843 |||||| ||| || |||||| || ||| || ||||| | |||| ||| |||||| Sbjct 26556 CGCCGTAGCAGTCCGCCAGGCCAGGGCACTCCGAAGGGCACATAAGCGCCCACTCGCCGT 26615 Query 2071844 CAGTCACCACGCGGCGCATAAACAGGTC--GCACGTCCACAG-GCCGTAAAAGAGATCGC 2071900 | | || || ||||||||| || |||| |||||| ||| ||| | || | Sbjct 26616 TCTGCTCGACACGCTTCATAAACAGATCTGGCAC--CCACAGCGCCAGGAAAATG-TCAC 26672 Query 2071901 GCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGG 2071960 |||| || || ||||||||||||||||| |||||||| | || | | || | Sbjct 26673 GCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAGGTCGATAAACTCAAACACATCCG 26732 Query 2071961 CGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||||||||||||| ||||| || || ||||||| |||||| Sbjct 26733 GGTGCCACGGCTCCAGGTAGATCGCAAACGCACCAGGGCGCTTGTTGCCGCC 26784 >seq22 Length=1423774 Score = 114 bits (126), Expect = 2e-19 Identities = 177/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||| |||| | | ||| ||| ||| ||| || ||| | | | Sbjct 519938 ACTTGGTGACCGAGCGAGTAGCCTCGGCAATGGCATGCTTGGACAGCTCACCGGGGAGAA 519997 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 |||| || || || ||||||||||| || | || ||| | |||||| || | Sbjct 519998 TCAGACGAACAGCAGTCTGGATCTCACGCGACGAAATGGTGCTCTTCTTGTTGTAGCTGG 520057 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || |||||||||| ||||||| |||| ||||| | || |||||||| | || Sbjct 520058 CGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCCTGCACGAACGAGTTGAGGA 520117 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | | ||| | ||||| ||||| || ||| |||||||||||||||||||| ||||| Sbjct 520118 TAGCCATGGCCTTGTTCGAGATACCAGTGTCCGGGTGCACCTGCTTGAGCACACGGTAAA 520177 Query 1485713 CAAAGGACGAGTA 1485725 ||| |||||| Sbjct 520178 TGTAGGTCGAGTA 520190 Score = 91.5 bits (100), Expect = 2e-12 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 431020 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 431079 ||||||||||||| || |||||| |||||||| ||| || |||| | | |||| Sbjct 1405073 CGCCCGAGAGCCGTGGATTTGTGGAGAACTCGTATTTGCGTGGTCTCACAGCCCACGAG- 1405131 Query 431080 TGTTTCTGCACATG--ATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGC 431137 | ||||| | |||| || | ||| || || ||||| |||| || || || |||||||| Sbjct 1405132 TTTTTCTTC-CATGCCATGGCCGGTCGTGAAGGTCTGATCGATACAGCTGTGAAGACGGC 1405190 Query 431138 CGAGACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAG 431180 |||||| || ||||| || ||||| | |||| || ||||| Sbjct 1405191 CGAGACTGGTTACATTCAACGTCGTCTCGTCAAGGCGCTGGAG 1405233 >seq33 Length=1115382 Score = 100 bits (110), Expect = 5e-15 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 2175301 GGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCG 2175360 || |||| ||||||||||| |||||| || || |||||||| || ||||||||||||| Sbjct 792722 GGTACGAGCCGTCGAGGTCAGGGTCGTTGATGAGACCCTTCCAGCCCACGGTCGTGCGCG 792781 Query 2175361 GCTTTTCGACATAGGCGCGCATGACCACCA 2175390 |||| |||| ||||||||||| ||||||| Sbjct 792782 GCTTCTCGAAGTAGGCGCGCATAACCACCA 792811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239911151779