Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq23 224 1e-52 seq22 113 6e-19 seq43 86.0 9e-11 seq33 86.0 9e-11 >seq23 Length=193243 Score = 224 bits (248), Expect = 1e-52 Identities = 384/543 (71%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 1455742 CCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCG 1455801 ||||||||| |||||||| ||||||||||| ||| |||| |||||| || ||||| | Sbjct 41301 CCGCTTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTAC-AAGAAGGCTG 41359 Query 1455802 AGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCG-ACACGGTCCACTGGGTG 1455860 ||||||| || |||||||| ||||||||||| || | || | || | | |||||| Sbjct 41360 AGGCCTCGTTCTGGACCGCTGAGGAGGTCGATCT-GTCGAAGGACTTGCACGACTGGGAC 41418 Query 1455861 T--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGC 1455917 ||| ||| |||| ||||||| || || | | |||||| || || || |||||| Sbjct 41419 AACCGCATGAACGACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTT-CGCCGC 41477 Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCC 1455977 || || || ||| |||||||||| | || || | || || || || || | Sbjct 41478 GTCGGACGGTATTGTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGC 41537 Query 1455978 AGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 ||||| || | || ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 41538 GGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTA 41597 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGC 1456097 |||||| || |||||||| ||| || ||| ||| || || |||| || ||| Sbjct 41598 CTCGCTGCTCATCGACACGTACATCCGCGACACGGCGCAGCGCGAGTACCTGTTCAACGC 41657 Query 1456098 CATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGAT---CAA 1456154 ||||| || | || |||| | | |||||||| ||||| | ||||| | Sbjct 41658 TATCGAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGA 41717 Query 1456155 CAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATC 1456213 ||| | | |||||| || | ||||| || || | ||||||| ||| ||||||||| Sbjct 41718 CAA-GCGTGCCTCG----TTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATC 41772 Query 1456214 TTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 || ||||||||| || |||| | ||||| ||||| |||||||| || |||||||| || Sbjct 41773 TTCTTCTCGGGCTCGTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGG 41831 Query 1456273 TCT 1456275 ||| Sbjct 41832 TCT 41834 Score = 161 bits (178), Expect = 1e-33 Identities = 190/252 (75%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| |||||| ||| ||||||||| || ||| | | ||| | ||||| ||| || Sbjct 41944 ATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCG 42003 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||| | | | ||||||||||||||||||| | ||||| |||||||| | Sbjct 42004 CTTATCGGCATGAATG-CTCGTCTCATGTGCCAGTACATTG-AGTTTGTGGCCGACCGTC 42061 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | || |||||| | ||||||||||| || | || || || | ||| Sbjct 42062 TGCTGGTCGCTCTCGGCAAC-CCGAAGCACTACCACTCGACGAATCCATTTGACTTTATG 42120 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGG-CGAGTACGCC 1456761 ||| |||||||| |||||||| | |||||||||||||| || |||| ||| || ||| Sbjct 42121 GAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTGTGGCCGACTATGCC 42180 Query 1456762 AAGGCCGGCGTC 1456773 ||||| || ||| Sbjct 42181 AAGGCTGGTGTC 42192 Score = 159 bits (176), Expect = 5e-33 Identities = 192/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || ||||| || || || || |||||| |||||||| ||||||||||| || || | Sbjct 27042 CCGACGCTGTTCAACGCGGGTACGCCGAACCCGCAGATGTCGTCGTGCTTCCTTGTGTGC 26983 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| ||||| |||||||| || |||||||||||| |||| ||| | ||| | Sbjct 26982 ATGAAGGACGACTCGATTGAGGGCATTTACGACACGCTCAAGGAGTGTGCGTTGATCAGC 26923 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| |||| || || || ||| | | ||| | |||||| | ||| | || | Sbjct 26922 AAGACGGCTGGTGGTATTGGTCTGAACATCCACTGCATCCGCGCCACTGGCTCGTATATT 26863 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 | ||||| ||||| | |||||| ||||||| ||||| || || || ||| ||||| Sbjct 26862 TCCGGCACGAACGGTGTGAGCAACGGTATTGTGCCAATGCTGCGTGTGTTCAACAACACG 26803 Query 260165 GCGCGCTACGTCGACCAGTGC 260185 ||||| ||||| |||||| || Sbjct 26802 GCGCGGTACGTTGACCAGGGC 26782 >seq22 Length=1423774 Score = 113 bits (124), Expect = 6e-19 Identities = 171/240 (71%), Gaps = 10/240 (4%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| ||| || ||| |||||||||||||||||||| || | | ||| Sbjct 520190 TACTCGACCTACATTTACCGTGTGCTCAAGCAGGTGCACCCGGACACTGGT-----ATC- 520137 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||| | ||| | |||||||| || | ||||| |||| ||||||| | Sbjct 520136 TCGAACAAGGCCATGGCTATCCTCAACTCGTTCGTGCAGGACATTTTCGAGCGCATCGCC 520077 Query 725019 ACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGA 725076 ||||||||| ||| || || ||| ||||||| | ||| || |||| |||| Sbjct 520076 ACCGAGGCC--TCGAAGCTCGCCAGCTACAACAAGAAGAGCACCATTTCGTCGCGTGAGA 520019 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 ||||||| || || || ||||| | | ||| || ||| ||| ||| ||| | |||||| Sbjct 520018 TCCAGACTGCTGTTCGTCTGATTCTCCCCGGTGAGCTGTCCAAGCATGCCATTGCCGAGG 519959 >seq43 Length=993532 Score = 86.0 bits (94), Expect = 9e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 |||| |||| |||| |||| || ||||||||||| || ||||| | | |||||||| Sbjct 151216 CGTCCGTGATGCGCCCAAATCGGAGGATGGCACATCGACTCTGGATCGGCTCGATGATTT 151275 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | |||| |||||| || | | ||| |||||||| | | | ||||| || Sbjct 151276 TGTTCGACTGGTTGCATGCAAAGCAAAAACGCGTCGTCGACGCGTAAATCTCCATAGTAC 151335 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 || | || || || || ||||||| | | || |||||||| || || || |||| Sbjct 151336 GTCGCAACGCTTGCTGTGCACCCGGCGTCATACTATCCGCCTCGTCCAGAATAATAATCT 151395 Query 333036 TGTGGCGCCCGTGCGGCAGATCAACCCTTTTC 333067 |||||||||| |||| || ||| ||||| Sbjct 151396 TGTGGCGCCCCGGCGGAAGTGACACCTTTTTC 151427 >seq33 Length=1115382 Score = 86.0 bits (94), Expect = 9e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 165540 GACGCCCTTTGTGTGGTCATGCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGG 165599 |||| |||| ||||| ||||||||||| |||| ||||||||||||||||| || ||| Sbjct 792821 GACGGCCTTGTGGTGGTTATGCGCGCCTACTTCGAGAAGCCGCGCACGACCGTGGGCTGG 792762 Query 165600 AAGGGCCTGGCCAGTGACCCCGATCTTGATGGCTCGTGCC 165639 ||||| || || ||||| || || || ||||||| || Sbjct 792761 AAGGGTCTCATCAACGACCCTGACCTCGACGGCTCGTACC 792722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805316437882