Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq23 183 4e-41
>seq23
Length=193243
Score = 183 bits (202), Expect = 4e-41
Identities = 569/869 (65%), Gaps = 25/869 (3%)
Strand=Plus/Plus
Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT--ATCAGTGTACTCTA 118761
|| || || || || ||||| || ||||| | |||||||| | |||| |||| |
Sbjct 26294 GGGAGCGCAATCGAGGCCAGGTTGCACACGGCCGTCTCATCGGGCGAGCAGT--ACTCGA 26351
Query 118762 TAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821
|||| |||||||||| ||| || ||||| || ||||| | ||||||||| || |||
Sbjct 26352 TAATCTCCGTGCACAGGTTCGAGCTCTTGATCGTGCCGAGGTTCTTTTGGTTGCTCTTGC 26411
Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881
||| ||||||||||| || ||| | || | ||||||||||| || | || |||||
Sbjct 26412 GGTTCGCAGCATCCTTGTACAGAATGAACGGATTGCCCGTCTCCGTCTGTGCCTCGAGAA 26471
Query 118882 TAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG-CTCGCCCCTCTTCCTCGTA 118939
|||| | ||| | | || || || | || | || || || || || ||||||
Sbjct 26472 TAGCGTACCACAGCTTCTGCGCCTTG-AC-CTTACGACGGAAACGACCTTCGCTCTCGTA 26529
Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999
|||| ||| || |||||||| || || | || | || || || ||
Sbjct 26530 CTTTTCGTACAGCTTCTCAAACTCCTCGCCGTAGCAGTCCGCCAGGCCAGGGCACTCCGA 26589
Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059
||||| | || | ||| | || || ||| || |||||||| || || ||||| |
Sbjct 26590 AGGGCACATAAGCGCCCACTCGCCGTTCTGCTCGACACGCTTCATAAACAGATCTGGCAC 26649
Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119
||| |||||| ||| | || || || |||| || | || || || ||||
Sbjct 26650 CCACAGCGCCAGGAAAATGTCACGCGCACGCACTTCGTCCTTGCCGTGGTTCTTGCGCAG 26709
Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179
|| | ||| || | | ||||| ||||||||| |||||||| | ||| | || |
Sbjct 26710 GTCGATAAACTCAAACACATCCGGGTGCCACGGCTCCAGGTAGATCGCAA---ACGCACC 26766
Query 119180 ACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233
| | || || |||||| || |||| ||| ||| ||| || ||||| |||||
Sbjct 26767 AGGGCGCTTGTTGCCGCCCTGGTCAACGTACCGCGCCGTGTTGTTGAACACACGCAGCAT 26826
Query 119234 TGGAATGATACCATCGGATTGGCCATTTGTCCCCCGA--ATACGAGACTTATTGGCTCTG 119291
||| | ||||| | | || || || || | ||||||| | | |||| | |
Sbjct 26827 TGGCACAATACCGTTGCTCACACCGTTCGTGCCGGAAATATACGAGCC--AGTGGCGCGG 26884
Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351
| |||||||| || ||||||||| || ||| ||| ||| ||| |||||| ||
Sbjct 26885 ATGCAGTGGATGTTCAGACCAATACCACCAGCCGTCTTGCTGATCAACGCACACTCCTTG 26944
Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 119411
|| || |||| || || || |||||||| |||| | | |||||||| ||||
Sbjct 26945 AGCGTGTCGTAAATGCCCTCAATCGAGTCGTCCTTCATGCACACAAGGAAGCACGACGAC 27004
Query 119412 ATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT 119471
|| || || | || ||||| |||||||| || || || | || || | ||| |||
Sbjct 27005 ATCTGCGGGTTCGGCGTACCCGCGTTGAACAGCGTCGGAGAGGCATGCGTAAAC--GCCT 27062
Query 119472 --TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 119529
| |||||| | || ||| ||||| | || | ||| || |||||||| || |
Sbjct 27063 TCTCGGACATGTAGTTGTACGTCTCAATAGCGCTCTCCACGTCCTCGCCGTGAATGCCTA 27122
Query 119530 TCGAGACCCGCATAAACATGTATTGGGGT 119558
| || ||||| | ||||| || |||
Sbjct 27123 CAGCCACACGCATGAGCATGTGCTGCGGT 27151
Score = 131 bits (144), Expect = 2e-25
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| |||||||||||||||| || || || |||||||| |||||||
Sbjct 41888 GCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCC 41829
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| |||||||||| |||||| |||| ||| ||||| |||||||||||
Sbjct 41828 GGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATG 41769
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTC 130167
|||||||| || ||||| | || |||||
Sbjct 41768 CCCTCCACGGCGGCAAACGCCACAAGGCGCTC 41737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434728443160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |