Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq57 192 2e-43 seq27 122 3e-22 seq59 100 9e-16 >seq57 Length=915591 Score = 192 bits (212), Expect = 2e-43 Identities = 594/908 (65%), Gaps = 21/908 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || || ||||| || || ||||| || || ||| Sbjct 612967 GCTGTTGGTATTGATTTGGGTACCACCTACTCGTGTGTGGCCGTCTGGCAGAACGACCGT 612908 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| ||||| || |||||| | || || || || |||||||| || ||| Sbjct 612907 GTCGAGGTCATTGCCAATGACCAGGGTAACCGCACGACCCCGTCGTACGTTGCCTTCACC 612848 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| || || | || || || || | || || || | || Sbjct 612847 GACACCGAGCGTCTGATCGGAGACGCCGCCAAGAACCAGGTGGCCATGAACCCCCACAAC 612788 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACA 349434 || || || || || ||||| |||||||| | | || | ||| | || || Sbjct 612787 ACTGTCTTCGACGCCAAGCGTCTTATTGGCCGCAAGTTCGCCGACGCTGAGGTC----CA 612732 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | || || | || || | || || | | ||| || || | || Sbjct 612731 GTCGGACATGAAGCACTGGCCATTCTCGGTCATTG---ACCGCAGTGGCAAGCCTGTCAT 612675 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552 |||| ||||| || ||||| | || || || || | || || || || || ||| Sbjct 612674 CAAGGTGGAATACAAGGGTGAGGAGAAG--ATCTTCACGCCTGAGGAGATCTCCTCGATG 612617 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611 || | | || ||| || | ||||| || || | || | || || | || || Sbjct 612616 GTCCTGCTGAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTCAAGGACGC 612558 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 || | ||||| || ||||| || || || | |||||| || || || || ||||| Sbjct 612557 CGTCGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGACGCTGG 612498 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 ||||| || | || || | | || || || || || || ||||| || ||||| Sbjct 612497 TGTTATTGCTGGTCTGAACGTCATGCGTATCATCAACGAGCCGACCGCTGCCGCTATTGC 612438 Query 349732 ATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 || || || || || | | ||| | || || || | || || || || || ||||| Sbjct 612437 GTACGGTCTCGACAAGAAGGACGACAAGGAGAAGAACGTACTCATCTTCGACTTGGGTGG 612378 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 ||||||||| ||||| || || || || |||| ||||| || || |||||||| || || Sbjct 612377 TGGTACTTTCGATGTGTCGCTCCTCACCATTGAGGAGGGTATCTTCGAAGTTAAGGCCAC 612318 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 ||| ||||| || || | ||||| || || ||||| || || ||||| || || || Sbjct 612317 TGCCGGTGACACGCACTTGGGTGGTGAGGACTTTGACAACCGCCTCGTGAACCACTTCGT 612258 Query 349912 TAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGT 349969 | || || ||||| |||| || | ||| || || || || | || ||||| Sbjct 612257 CCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACGACCAACGCTCGTGCGCTGCGT 612200 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | ||||| | || ||||||||||| | | || || || | || ||| | Sbjct 612199 CGTCTCCGCACTGCCTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCTCAGACCACC 612140 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| ||||| || || ||| || | || |||| | || || || ||||| || Sbjct 612139 ATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACTTCGATCACCCGTGCCCGC 612080 Query 350090 TTTGAAGA 350097 || || || Sbjct 612079 TTCGAGGA 612072 >seq27 Length=46380 Score = 122 bits (134), Expect = 3e-22 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||||| || |||||||| ||| || || || || | Sbjct 91 TTTGCATACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGT 150 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || |||||||| || | || || ||||||||||| | ||||| || | Sbjct 151 AGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGT 210 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || ||||| || ||||| || ||||| || |||| || || | Sbjct 211 CCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAG 270 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||| || || || || || || ||||| ||||| Sbjct 271 ACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325 >seq59 Length=643831 Score = 100 bits (110), Expect = 9e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || || || |||||||| || ||||| ||| Sbjct 499052 ACCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACT 499111 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||| ||||| || || || || ||||| |||||||| ||||| || ||||| ||||| Sbjct 499112 GAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGG 499171 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTAC 140662 |||||| || || || ||||| || ||||| || Sbjct 499172 AATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253215733983