Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq23 297 2e-75 seq22 165 9e-36 >seq23 Length=193243 Score = 297 bits (328), Expect = 2e-75 Identities = 500/719 (70%), Gaps = 16/719 (2%) Strand=Plus/Minus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||||||| ||| ||| | | ||| |||||||| ||| | || || |||||||| Sbjct 27088 TGAGACGTACAACTACATGTCCGAGAAGGCGTTTACGCATGCCTCTCCGACGCTGTTCAA 27029 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 ||| |||||| |||| ||||||||| |||||||| ||| |||||||| ||||| Sbjct 27028 CGCGGGTACGCCGAACCCGCAGATGTCGTCGTGCTTCCTTGTGTGCATGAAGGACGACTC 26969 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||| || ||||| ||||| ||||||||||||||||| ||| |||| | | ||||| Sbjct 26968 GATTGAGGGCATTTACGACACGCTCAAGGAGTGTGCGTTGATCAGCAAGACGGCTGGTGG 26909 Query 53422 TATCGGT------ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475 ||| ||| ||||||||| |||| || | ||| | || || || Sbjct 26908 TATTGGTCTGAACATCCACTGCA------TCCGCGCCACTGGCTCGTATATTTCCGGCAC 26855 Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 |||||| || | | || || ||||| ||||| || || |||||||||||||| ||||| Sbjct 26854 GAACGGTGTGAGCAACGGTATTGTGCCAATGCTGCGTGTGTTCAACAACACGGCGCGGTA 26795 Query 53536 CGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595 ||| ||||||| || |||||| || |||| || |||||||| ||||||||||| Sbjct 26794 CGTTGACCAGGGCGGCAACAAGCGCCCTGGTGCGTTTGCGATCTACCTGGAGCCGTGGCA 26735 Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTG 53655 | | || | | |||||| |||| ||||| ||| || || | || || |||| || Sbjct 26734 CCCGGATGTGTTTGAGTTTATCGACCTGCGCAAGAACCACGGCAAGGACGAAGTGCG-TG 26676 Query 53656 C-CGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGG 53714 | |||||| | || || |||||| | || || || || ||| | || ||| || Sbjct 26675 CGCGTGACATTTTCCTGGCGCTGTGGGTGCCAGATCTGTTTATGAAGCGTGTCGAGCAGA 26616 Query 53715 ACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTG 53774 ||| |||||| || |||||||| |||||||| ||||| || |||||| | Sbjct 26615 ACGGCGAGTGGGCGCTTATGTGCCCTTCGGAGTGCCCTGGCCTGGCGGACTGCTACGGCG 26556 Query 53775 AGGAGTTTAACGAGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTC 53833 |||||||| | || |||| | ||||| || | | || || | | |||||| Sbjct 26555 AGGAGTTTGAGAAGCTGTACGAAAAGTACG-AGAGCGAAGGTCGTTTCCGTCGTAAGGTC 26497 Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893 ||||||| || | ||| | || || ||| || ||| ||||||||| | |||| | Sbjct 26496 AAGGCGCAGAAGCTGTGGTACGCTATTCTCGAGGCACAGACGGAGACGGGCAATCCGTTC 26437 Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || ||||||||| | | ||| ||||||||||| |||||| ||||| ||||| Sbjct 26436 ATTCTGTACAAGGATGCTGCGAACCGCAAGAGCAACCAAAAGAACCTCGGCACGATCAA 26378 Score = 129 bits (142), Expect = 6e-25 Identities = 528/812 (65%), Gaps = 48/812 (6%) Strand=Plus/Minus Query 74481 TCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGAAAGGGTTCTTT 74540 || |||||||| | ||| || | || ||||||||||||||| |||| || || ||| | Sbjct 42158 TCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGTC 42099 Query 74541 GCACCGTAAATAGGCTTC----TCCCCAAACTGTGCCATGAGGCGATCCGCCACAAATTG 74596 | ||| ||||| | || | | | ||| || || || |||||||| | Sbjct 42098 GAGTGGTAGT---GCTTCGGGTTGCCGAGAGCGA-CCAGCAGACGGTCGGCCACAAACTC 42043 Query 74597 AATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCAC-GGCAGTGCCTCGG 74655 ||||||||| ||| | |||| ||||||||| || ||| ||||| ||||| | Sbjct 42042 AATGTACTGGCACATGAGACGAGCATTCATGCCGATAAGCGA-CACAGGCAGAGCCTCCG 41984 Query 74656 TGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGAATGTCTTTGGAAG 74715 | | ||| || |||| | | | |||| | | ||| || | || | || || Sbjct 41983 TCAAAAAGTCCTTCTCGATCGAGACAGCC---TCGGTAATGATGCGGTTGACCGTGTCAG 41927 Query 74716 GG------CACTTTTCCCTCAGGTGAGAGTAAAGCGT-CACGGCAAACTCCTGATGCGAG 74768 || | ||| | |||||||| | | ||| |||| |||| || ||| Sbjct 41926 GGTGCGAGCGCTTCT---TCAGGTGACTGAACAGCAAGCACG-CAAAGTCGGTGTGCAGA 41871 Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || || || | | | || | || ||||| ||||| || || ||||| || ||||||||| Sbjct 41870 CCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTC 41811 Query 74829 TTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||| ||| ||||| | | || || || || |||||||||||| || || ||||| Sbjct 41810 TTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAA 41752 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATT 74943 || |||||||| | || ||||| ||| || ||| ||||| | ||||| | Sbjct 41751 CGCCACAAGGCGCTCCGAGAACGAGGCA-CGCTTGTCCGCAATCCAGCGAAGGGCCCACT 41693 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGC-CTTCT 75000 | || || | || || | || | || ||||| || | ||| ||| || || || | Sbjct 41692 CGGCCTTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCGCGCTGCG 41633 Query 75001 CTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACT 75060 | || | || || | | |||| || | || ||||| |||||||| ||||| || Sbjct 41632 C--CGTG-TCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCT 41576 Query 75061 CGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | | | |||| | ||||||| | || ||||| || | ||| || || || ||| Sbjct 41575 CCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGA 41516 Query 75119 AAAATTCATGTCGATA--TTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGT 75176 || || | | | ||||| | || || |||||||| |||||||| || || || Sbjct 41515 AACGCTC----CAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGG 41460 Query 75177 ACCATTTTGATAAAGTGGCGCTC---ATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCC 75233 || | | | |||||| ||||| |||| || | |||||||| || | || |||| Sbjct 41459 ACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCC 41400 Query 75234 CCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || || ||| | |||||| | |||||||| Sbjct 41399 TTCGACAGATCGACCTCCTCAGCGGTCCAGAA 41368 Score = 120 bits (132), Expect = 3e-22 Identities = 309/461 (67%), Gaps = 21/461 (5%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||||| || ||| | |||| ||||| || ||||||||| |||||| | Sbjct 25866 GGCTTGCGCAACTCGCTTCTCCTTTCGCCGATGCCGACTGCGTCGACGAGCCAGATCCTT 25807 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| |||||| || ||||||||||||| |||||| ||| ||||||| || || Sbjct 25806 GGCTTTAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTGCTCGCC 25747 Query 55598 GGTGAGTT---TGTCATGATCAACAAGCACCT-CGTCAAGGACCTGCAGAAGATCAACAA 55653 || ||||| ||| ||| | || || ||| || ||| || | Sbjct 25746 GGCGAGTTCCAAGTCGTGAACCCGTGGCTGCTGCGT----GAGCTGGTCGAGCTGGGTCT 25691 Query 55654 GTGGAACCCGCAGATCAAG--ACGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA--- 55707 ||||||| | ||| ||| || || |||| || |||| || || |||| || Sbjct 25690 GTGGAACGAGACGATGAAGCAGCGCATCATTGCGC---ACGGCGGCTCGATCCAAAACGT 25634 Query 55708 -TCTGGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA 55766 |||| ||||| | |||||| | | ||| ||| |||||||||||| |||| Sbjct 25633 CCCTGG-CATTCCCGACCACATCAAGGCGCTGTACAAGACCGTGTGGGAGATTAGCCAGA 25575 Query 55767 AGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTG 55825 || ||| | || |||||| || || |||||||||| |||| |||| |||| || Sbjct 25574 AG-GTCATTATCGACATGTCGGCGGACCGTGGTGCGTTCATCTGCCAGAGCCAGAGCTTG 25516 Query 55826 AACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGG 55885 |||||| | || || | | | | || | | ||||||||||| ||||| ||| Sbjct 25515 AACATCCACCTGAGCTCGCCGACGTTCGGCCAGCTTACGTCGATGCACTTCTACGGCTGG 25456 Query 55886 AAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 |||||||| |||||||| || | ||||| ||||| || || Sbjct 25455 AAGAAGGGTCTCAAGACCGGCAGCTACTACCTGCGCACGCG 25415 >seq22 Length=1423774 Score = 165 bits (182), Expect = 9e-36 Identities = 316/457 (69%), Gaps = 14/457 (3%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || || |||||||| || ||||||| || | ||| |||||||| ||||| | Sbjct 276872 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 276931 Query 117212 TCAGGCTCCAC---CTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 || ||||| | ||| | |||||||| | ||| || |||| ||||| || || Sbjct 276932 TCCGGCTCAATACTCTGGCCATCGTCGTCC---AAGTAGTTCAGCAACGCATCATCTTTC 276988 Query 117269 GGATCGAATATGTT-CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 |||| ||| | || | || ||| || || |||||||||||||| | || || Sbjct 276989 GGATGGAAAAGCTTGCGTGTAATACGTGGCACCGCC-GTGAAAATGTAACGCGCACTGGC 277047 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 |||||||| || || | ||||||||| || || ||| ||||| | ||||||| Sbjct 277048 GGCATCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCAC 277107 Query 117388 GTTGTTGGCGCCCACAA-AGTTTTGAGCCAAGTTGACAATCGTACCTTG--GAGGCTCGC 117444 |||||| || |||||| ||| || ||||| ||||||||| | || || ||| Sbjct 277108 GTTGTT-GCTACCACAATAGTCCTGCGCCAACCCGACAATCGT--CATGACCAGACTCTG 277164 Query 117445 CTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCAT 117504 || |||||||| |||||||| || |||| ||||| || |||||| |||||| || Sbjct 277165 GTCGCCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGAT 277224 Query 117505 GTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAG 117564 || | | ||| || ||||| || |||| | ||| |||||||||| ||||| || Sbjct 277225 TTCCGTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAG 277284 Query 117565 ACCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 ||||||| ||| || ||||| || || ||||| Sbjct 277285 ACCATCCACCATACTGGGAATCGAGCGAATGTTGTCC 277321 Score = 140 bits (154), Expect = 4e-28 Identities = 231/331 (70%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| || || || || | |||| || ||||| ||||||| | ||| || Sbjct 277760 AGTCCCTTGATGTGCGAGCCATCGAAATCCTGGTCCGTCATAATCATCAAACTGCCATAT 277819 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || ||| | || || ||| || || ||||| || || ||||| |||| ||| | | Sbjct 277820 CGCAAACCATCCACAGACGAATACACTTTGCCATGCTGCAGACCGAGAATCTCTTTGATG 277879 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATG-GTGGCGTCCCGAACGTTGCGCGG 118191 || | ||| || | | | | ||| | ||| | ||| || || || || | | Sbjct 277880 TTCTTGATCTCCGTGTTCTTCATAATCTGATC-ATGCGAGGCTTCTCGCACATTCAACAG 277938 Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAAT 118251 |||||| |||||||| ||||| || | ||||| || || | |||||||| | | Sbjct 277939 CTTACCACGCAGTGGGAACACACCGTAGGCATCACGACCGACCTCACTCAAGCCAGAGAC 277998 Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATG 118311 |||||| ||||| |||||||||||||| |||| ||| | ||||| ||| ||||| | Sbjct 277999 AGCAAGCGCCTTAGCCGAGTCACCCTCTGTAAGAATCAACGTGCATTCGCCACTGCGTTT 278058 Query 118312 AGTACCGGCCCAATTAGCATCATCCAGCTTC 118342 || |||||||| || ||||| ||||||||| Sbjct 278059 CGTGCCGGCCCAGTTCGCATCTTCCAGCTTC 278089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215582747800