Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq59 105 4e-18 seq27 98.7 6e-16 seq33 87.8 1e-12 >seq59 Length=643831 Score = 105 bits (116), Expect = 4e-18 Identities = 120/160 (75%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| |||| |||| || || ||||| || ||||| |||||||| || Sbjct 499053 CCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTG 499112 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| ||| |||| || || || || |||||||| || | ||||||||| ||||| || Sbjct 499113 AGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGA 499172 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAA 34639 | ||||||||||||| ||| |||| ||| || ||| || Sbjct 499173 ATTCCCTCCTTGTCT-TGAATCTTTGCTTTGACTATACAA 499211 >seq27 Length=46380 Score = 98.7 bits (108), Expect = 6e-16 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| || |||||||||||||| || ||||| || || || || ||| Sbjct 108 AGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGC 167 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || ||||| ||||| || || || ||||||||||| || | || ||| Sbjct 168 CCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCC 227 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | || |||||| |||||| |||| ||| Sbjct 228 TTGTCCTGGATC-TTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGT 286 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 ||||| || || || | ||| || || ||||| |||||| || Sbjct 287 GATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATGATG 329 >seq33 Length=1115382 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| || |||||||||||||| || ||||| || || || || || |||| || Sbjct 831278 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 831337 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || ||||| || || || | ||||||||||||||| || | ||||||||||| Sbjct 831338 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 831397 Query 34617 GATCTT 34622 |||||| Sbjct 831398 GATCTT 831403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729366018213