Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq59 179 9e-40 seq33 170 4e-37 seq27 161 2e-34 seq60 116 9e-21 seq58 84.2 5e-11 >seq59 Length=643831 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||||||||| ||||| || |||||||| || || ||||| | ||||| Sbjct 401453 AGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 401394 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| |||||||| ||||||| || ||||||||| Sbjct 401393 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 401334 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct 401333 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 401274 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || ||||| ||||| Sbjct 401273 TTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||| || ||| ||||||||||||||||| || || || Sbjct 499058 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 499117 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || |||||||| || || ||||| || || ||||| || ||||||| ||| Sbjct 499118 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499177 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCAC 211039 |||||||| || |||||| ||| || Sbjct 499178 CTCCTTGTCTTGAATCTTTGCTTTGAC 499204 >seq33 Length=1115382 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||||||| ||| || |||||||| || || ||||| | || || Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| || || || |||||||| ||||||| || ||||||||| Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| ||| ||||||||||| ||||||||| Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | ||||| Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487 >seq27 Length=46380 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||||||| ||| || |||||||| || || || || | ||||| Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || || ||||| | |||||||||||| ||||||| |||||||||||| Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | ||||| Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325 >seq60 Length=383220 Score = 116 bits (128), Expect = 9e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || ||| ||| || |||||||| || || || || | ||||| Sbjct 383046 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 383105 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || ||||| ||||| || |||||||| || |||| || ||||||||| Sbjct 383106 TCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCC 383165 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||| || ||||| || || ||||| ||| ||| || || Sbjct 383166 TGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTC 383212 >seq58 Length=830889 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865 ||| || |||||||||||| | || || || || || ||||||| | || || | Sbjct 651404 CCTCCCGAAGAAGCACGGACGTGGTGGTCAGTCCGCGTTGCGTTTCTCGCGTCTGCGTGA 651345 Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925 || | || ||||| || | ||||| || ||| |||| | ||| ||||||| Sbjct 651344 TGAGGCTCGTCATAACTATGTGCGTAAAGTCGCTGAGTACGCTACCCAGCACTTTATCAC 651285 Query 139926 AGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981 |||||||||||| ||| ||||| |||| ||||| ||||| || || ||||||| Sbjct 651284 CGACAACAAGTGTAATGTGACTGGTCTTGTGTTGGCTGGTTCTGCCGATTTCAAGA 651229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151094050265