Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq59 179 9e-40
seq33 170 4e-37
seq27 161 2e-34
seq60 116 9e-21
seq58 84.2 5e-11
>seq59
Length=643831
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||||||||| ||||| || |||||||| || || ||||| | |||||
Sbjct 401453 AGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 401394
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| |||||||| ||||||| || |||||||||
Sbjct 401393 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 401334
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || |||||||||
Sbjct 401333 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 401274
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || ||||| |||||
Sbjct 401273 TTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || ||||| || ||| ||||||||||||||||| || || ||
Sbjct 499058 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 499117
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || || ||||| || || ||||| || ||||||| |||
Sbjct 499118 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499177
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCAC 211039
|||||||| || |||||| ||| ||
Sbjct 499178 CTCCTTGTCTTGAATCTTTGCTTTGAC 499204
>seq33
Length=1115382
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||||||| ||| || |||||||| || || ||||| | || ||
Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| || || || |||||||| ||||||| || |||||||||
Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| ||| ||||||||||| |||||||||
Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | |||||
Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487
>seq27
Length=46380
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||||||| ||| || |||||||| || || || || | |||||
Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || ||||| | |||||||||||| ||||||| ||||||||||||
Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || |||||||||
Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | |||||
Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325
>seq60
Length=383220
Score = 116 bits (128), Expect = 9e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| ||| || |||||||| || || || || | |||||
Sbjct 383046 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 383105
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| ||||| || |||||||| || |||| || |||||||||
Sbjct 383106 TCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCC 383165
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|||||||| || ||||| || || ||||| ||| ||| || ||
Sbjct 383166 TGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTC 383212
>seq58
Length=830889
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865
||| || |||||||||||| | || || || || || ||||||| | || || |
Sbjct 651404 CCTCCCGAAGAAGCACGGACGTGGTGGTCAGTCCGCGTTGCGTTTCTCGCGTCTGCGTGA 651345
Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
|| | || ||||| || | ||||| || ||| |||| | ||| |||||||
Sbjct 651344 TGAGGCTCGTCATAACTATGTGCGTAAAGTCGCTGAGTACGCTACCCAGCACTTTATCAC 651285
Query 139926 AGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
|||||||||||| ||| ||||| |||| ||||| ||||| || || |||||||
Sbjct 651284 CGACAACAAGTGTAATGTGACTGGTCTTGTGTTGGCTGGTTCTGCCGATTTCAAGA 651229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151094050265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |