Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq59 161 2e-34
seq27 158 3e-33
seq33 149 1e-30
seq31 131 4e-25
>seq59
Length=643831
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || ||||| ||||| || || || |||| ||||| ||| || ||
Sbjct 401463 ACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 401404
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| || || |||||||| || ||||||||
Sbjct 401403 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACC 401344
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||||||| ||||| ||||| || | ||||| || |
Sbjct 401343 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAG 401284
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || || | || || | ||||||||||||
Sbjct 401283 GGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242
Score = 98.7 bits (108), Expect = 2e-15
Identities = 109/144 (76%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||| || ||||| || ||| ||||||||||| || || || | ||
Sbjct 499058 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 499117
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||| || ||||||||||| || || ||||| || || ||||| || || ||||| ||
Sbjct 499118 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499177
Query 225612 TTCCTTGTCTTGGATCTTTTGCTT 225635
||||||||||| ||| |||||||
Sbjct 499178 CTCCTTGTCTTGAATC-TTTGCTT 499200
>seq27
Length=46380
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| |||||| || || |||| ||||| ||| || ||| | ||||||
Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| ||||| ||||| | ||||||||||| || |||||||||||||||||
Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||| |||||||| | ||||| || | |||||||||
Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | ||||||
Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325
>seq33
Length=1115382
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| |||||| || || |||| ||||| ||| | || | || ||
Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| |||||||| || || || |||||||| || |||||||| ||||||||
Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||| ||||| |||| || || || | ||||||||||
Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| ||| || | ||| | ||||||
Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487
>seq31
Length=6808
Score = 131 bits (144), Expect = 4e-25
Identities = 174/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 7478 TAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATAT 7537
|||| || || || ||| | |||| | |||| | |||||||| ||| |||| |
Sbjct 3895 TAGGAACAATGTTCTCTGTACTTATTCGTGCAGAACTTGCTGCTCCTGGTGTTCAAGTTC 3954
Query 7538 TGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTT 7597
| |||| || ||||| | || || |||||||| || ||||| || ||||||| |
Sbjct 3955 TAGGTGGAAACCATCAACTATTTAATGTAATTATTACAGCACATGCTTTCCTTATGATCT 4014
Query 7598 TCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGA 7657
||||| | |||||||| | | | || || || || ||||||| || | ||| ||||||
Sbjct 4015 TCTTTATGGTTATGCCAGCTCTAATGGGAGGATTTGGAAATTACTTTGCACCTGTAATGA 4074
Query 7658 TTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGC 7717
|||| || |||||||||||| ||| | || || ||||| ||||| || ||||||| |
Sbjct 4075 TTGGAGCAGTTGATATGGCTTTCCCACGACTAAATAATATTAGTTTCTGGCTACTACCTC 4134
Query 7718 CT 7719
||
Sbjct 4135 CT 4136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530267962334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |