Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq59 161 2e-34 seq27 158 3e-33 seq33 149 1e-30 seq31 131 4e-25 >seq59 Length=643831 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| ||||| || || || |||| ||||| ||| || || Sbjct 401463 ACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 401404 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || |||||||| || |||||||| Sbjct 401403 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACC 401344 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| || | ||||| || | Sbjct 401343 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAG 401284 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | |||||||||||| Sbjct 401283 GGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242 Score = 98.7 bits (108), Expect = 2e-15 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || ||||| || ||| ||||||||||| || || || | || Sbjct 499058 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 499117 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || ||||||||||| || || ||||| || || ||||| || || ||||| || Sbjct 499118 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499177 Query 225612 TTCCTTGTCTTGGATCTTTTGCTT 225635 ||||||||||| ||| ||||||| Sbjct 499178 CTCCTTGTCTTGAATC-TTTGCTT 499200 >seq27 Length=46380 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| |||||| || || |||| ||||| ||| || ||| | |||||| Sbjct 114 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 173 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| | ||||||||||| || ||||||||||||||||| Sbjct 174 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 233 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| |||||||| | ||||| || | ||||||||| Sbjct 234 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 293 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | |||||| Sbjct 294 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325 >seq33 Length=1115382 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| |||||| || || |||| ||||| ||| | || | || || Sbjct 831276 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 831335 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || || |||||||| || |||||||| |||||||| Sbjct 831336 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 831395 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| |||| || || || | |||||||||| Sbjct 831396 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 831455 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 831456 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487 >seq31 Length=6808 Score = 131 bits (144), Expect = 4e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 7478 TAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATAT 7537 |||| || || || ||| | |||| | |||| | |||||||| ||| |||| | Sbjct 3895 TAGGAACAATGTTCTCTGTACTTATTCGTGCAGAACTTGCTGCTCCTGGTGTTCAAGTTC 3954 Query 7538 TGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTT 7597 | |||| || ||||| | || || |||||||| || ||||| || ||||||| | Sbjct 3955 TAGGTGGAAACCATCAACTATTTAATGTAATTATTACAGCACATGCTTTCCTTATGATCT 4014 Query 7598 TCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGA 7657 ||||| | |||||||| | | | || || || || ||||||| || | ||| |||||| Sbjct 4015 TCTTTATGGTTATGCCAGCTCTAATGGGAGGATTTGGAAATTACTTTGCACCTGTAATGA 4074 Query 7658 TTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGC 7717 |||| || |||||||||||| ||| | || || ||||| ||||| || ||||||| | Sbjct 4075 TTGGAGCAGTTGATATGGCTTTCCCACGACTAAATAATATTAGTTTCTGGCTACTACCTC 4134 Query 7718 CT 7719 || Sbjct 4135 CT 4136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530267962334