Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq23 141 8e-29
>seq23
Length=193243
Score = 141 bits (156), Expect = 8e-29
Identities = 540/837 (65%), Gaps = 23/837 (3%)
Strand=Plus/Minus
Query 4281 TCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTT 4340
||||| || || | ||||| | | ||| || || |||||||| ||||| ||||| ||
Sbjct 42158 TCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGTC 42099
Query 4341 GCGTTGTAATGTTTTTCACACTTT----AGAGCTACAAGCAATCGGTCAGCTACAAATTC 4396
| || ||| || || | || ||||| || |||| ||||| || ||||| ||
Sbjct 42098 GAGTGGTAGTGCTT----CGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACAAACTC 42043
Query 4397 TATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATG 4455
|| ||||||| |||||| ||| || || || || | |||||| || || | |
Sbjct 42042 AATGTACTGGCACATGAGACGAGCA-TTCATGCCGATAAGCGACACAGGCAGAGCCTCCG 41984
Query 4456 TCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCT---T 4512
||||||| || | || || | || || || || || || || | | || |
Sbjct 41983 TCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGACCGTGTCAGGGT 41924
Query 4513 TAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTT 4572
|| | || || | || | |||| || |||||||| || |||| ||| |
Sbjct 41923 GCGAGCGCTTCTTCAG---GTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCT 41867
Query 4573 CGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAA 4632
|||| | | |||| || ||||| || |||| | || ||||| | ||| | ||| || |
Sbjct 41866 CGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCA 41807
Query 4633 GCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTA 4692
|||| || || | ||||| || || || ||||| ||||| || |||||||||||||| |
Sbjct 41806 GCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCA 41747
Query 4693 CTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751
| | || | |||||| || || ||||| |||||| | ||||| | ||
Sbjct 41746 CAAGGCGCTCCGAGAACGAGGCACGC-TTGTCCGCAATCCAGCGAAGGGCCCACTCGGCC 41688
Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACT-TTTTTCAAATGG 4810
|| | ||| || ||||| || | |||||||| || | |||| | |
Sbjct 41687 TTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAA-CAGGTACTCGCGCTGCGCCGT 41629
Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870
||| | || || ||||| || || || || | || || || || || || ||
Sbjct 41628 GTCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCAT 41569
Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930
|||||| || ||||| ||||| | ||| || | || || |||||||| | || | ||
Sbjct 41568 AATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTC 41509
Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990
| | ||| ||||| || |||||||| || || || ||||| | || | |
Sbjct 41508 CAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGGACGGTACTCAC 41449
Query 4991 AAAGT---ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATC 5047
||||| || | ||| | | | || | ||||| | |||| || || | | |||
Sbjct 41448 AAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATC 41389
Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104
|| || ||| | ||||| ||||| || || || || |||||||| | ||| || ||
Sbjct 41388 GACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCGCCCAGATCTC 41332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049282515313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |