Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq27 181 2e-40
seq33 172 1e-37
seq59 168 1e-36
seq60 152 1e-31
seq22 113 9e-20
>seq27
Length=46380
Score = 181 bits (200), Expect = 2e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| || || ||||| || | ||||| || || ||||||||||||||
Sbjct 98 ACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 157
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| |||||||| | || || || ||||||||||| ||||||||||| ||
Sbjct 158 CAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGG 217
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| |||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 218 AATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCAC 277
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| || || | ||||||||||| || |||||
Sbjct 278 CTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 325
>seq33
Length=1115382
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944
||||| ||||| || | ||||| || || |||||||||||||| || ||||||||
Sbjct 831273 CGAAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCG 831332
Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004
||||| || || || || || || || | ||| |||||||| |||||||||||||||
Sbjct 831333 TCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTG 831392
Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064
|| |||||||| || || || | ||||| |||||||| | || || ||||| ||||||
Sbjct 831393 TCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATC 831452
Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || |||| |||||| ||||| || |||||
Sbjct 831453 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 831487
>seq59
Length=643831
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | || || || ||||||||||||||
Sbjct 401469 ACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 401410
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || || ||||||| || |||||||| ||
Sbjct 401409 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 401350
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 401349 AATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 401290
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| || || | ||||| ||||| | |||||
Sbjct 401289 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242
Score = 154 bits (170), Expect = 3e-32
Identities = 126/153 (82%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| |||||||| || | |||||||||||||||||||| ||||||
Sbjct 499052 ACCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACT 499111
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || |||||||| || || ||||||||||||| ||| ||||| || ||
Sbjct 499112 GAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGG 499171
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024
||| |||||||||||||| ||||||||||| ||
Sbjct 499172 AATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499204
>seq60
Length=383220
Score = 152 bits (168), Expect = 1e-31
Identities = 143/182 (79%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || || || || | |||||| || || ||||||||||||||
Sbjct 383031 CCACCACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 383090
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||||||||| || || || || || || || | ||| |||||||| |||
Sbjct 383091 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGA 383150
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || ||| |||| || |||||||| | |||||||
Sbjct 383151 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACT 383210
Query 283053 TC 283054
||
Sbjct 383211 TC 383212
>seq22
Length=1423774
Score = 113 bits (124), Expect = 9e-20
Identities = 303/456 (66%), Gaps = 17/456 (4%)
Strand=Plus/Plus
Query 316750 TGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGA 316809
||||||||||| || || || || || | | || | ||||||| ||| || || ||
Sbjct 408386 TGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACAGCACGGGCCAGG 408445
Query 316810 GCAAGCTTCATTTTCCACCCCCCGGAAAGAGTGTTAATCGGGGCAGATTGGCGCTCAACA 316869
||||||||||| ||||| || || ||||||| | ||||| ||| || |||| |
Sbjct 408446 GCAAGCTTCATCTTCCAACCACCCGAAAGAGCAGTGATCGGACCAGCCTGACGCTGCTCG 408505
Query 316870 TCAAAGCCAA-CTGATTCGAGAGTAGACACGATTTTTTCACGAGACCATGTGTTTTCTTT 316928
|| ||||| | || ||| || || ||| | | || || | | | || |
Sbjct 408506 TCGAAGCCCATCTCCTTC-AGGGTCGACGAGGCAGTCTCGCG-GTCGACGTTCAGGCG-- 408561
Query 316929 AACTTGGTCGTCATTGGCAATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAG 316988
| | |||| | | ||||| || | || || ||| | || || ||||||||
Sbjct 408562 -AGT--GTCGGCCAGG---ATGAACTCGAGAATCGAAATGTCACCCTCCGAACCGTCGAG 408615
Query 316989 GTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACC 317048
||| ||||| || || || || | || || |||||| || |||| ||||||
Sbjct 408616 GTCGTGCTCGACGTACCAGGTCTTGACCTCCTCAGGCGACGGGAAGCCCTCCACCTGACC 408675
Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108
|||| || || | ||| || |||||||| || | |||||| | || || ||||| ||
Sbjct 408676 GTTCTGGATGGCGCGCATAAGGGTCGACTTACCCGAACCATTACGACCACAGAGACCGTA 408735
Query 317109 CCGATTTCCCTTCTTCAGATTAAAACGGGT---GTTGTTCAGAAGAATCTTACCACCATA 317165
|| | || ||| ||| | |||| | ||||||| ||||||||| |||| ||
Sbjct 408736 GCGGTGGCCACGCTTGAGACGCA---GGGTAGCGGTGTTCAGCAGAATCTTAGCACCGTA 408792
Query 317166 TGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
|| || ||||||| ||| | |||||||||||| ||
Sbjct 408793 GGCGAGCGAGAACTGACAGTTACACAGGTCCTCACC 408828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738381907894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |