Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08-
11] 61 sequences; 8,158,346 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq33 150 2e-31
seq27 145 7e-30
seq59 140 3e-28
seq60 120 3e-22
>seq33
Length=1115382
Score = 150 bits (166), Expect = 2e-31
Identities = 162/212 (76%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
|||||| || || |||||||||||||| ||||| |||||| ||||||||| |||| ||
Sbjct 831278 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 831337
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
|||||||| || ||||| || || ||||||||||||| |||| | ||||||||||
Sbjct 831338 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 831397
Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
||| || |||| || | | | ||||| ||||| ||||| | ||| ||||| |
Sbjct 831398 GATCTTGGCCTTC-ACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCT 831456
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || ||||| ||||| ||||| || ||||||
Sbjct 831457 TGCCAGTCAGAGTCTTGACGAAGATTTGCATG 831488
>seq27
Length=46380
Score = 145 bits (160), Expect = 7e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 99 CCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 158
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| |||||| | || || | |||||| || || || |||| ||| |||||||||| |||
Sbjct 159 AGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGA 218
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || |||| || | | | ||||| ||||||||
Sbjct 219 ATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACATTGTCGATCGTGTCTGAAGACTCCAC 277
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||| || ||||| || || || |||||||| |||||||| ||||||
Sbjct 278 CTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATG 326
>seq59
Length=643831
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| || || || ||||||||| ||||| ||||||
Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || ||||||||||| || ||||| ||||||||||||||||||| |||
Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||||| ||| || ||||| | | |||||| |||||||||
Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401289
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || || || || ||||| ||||| | |||||
Sbjct 401288 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242
Score = 107 bits (118), Expect = 2e-18
Identities = 114/149 (77%), Gaps = 1/149 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| ||||| ||||| || || || ||||||||||| |
Sbjct 499053 CCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTG 499112
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || ||| |||| || |||||||| ||||| || ||||| |||||||| |||| |||
Sbjct 499113 AGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGA 499172
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT 41784
| | |||||||| | ||| | |||||||
Sbjct 499173 ATTCCCTCCTTGT-CTTGAATCTTTGCTT 499200
>seq60
Length=383220
Score = 120 bits (132), Expect = 3e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || || |||||||||||||||||||| ||||| ||||||
Sbjct 383030 GCCACCACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 383089
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| | || || |||||||| || ||||| || || ||||||||||||| ||
Sbjct 383090 CAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGG 383149
Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778
|| || |||||||||| ||| ||
Sbjct 383150 AATGCCCTCCTTGTCCTGGATCTT 383173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303647493200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |