Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq33 150 2e-31 seq27 145 7e-30 seq59 140 3e-28 seq60 120 3e-22 >seq33 Length=1115382 Score = 150 bits (166), Expect = 2e-31 Identities = 162/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || |||||||||||||| ||||| |||||| ||||||||| |||| || Sbjct 831278 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 831337 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || ||||| || || ||||||||||||| |||| | |||||||||| Sbjct 831338 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 831397 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| || | | | ||||| ||||| ||||| | ||| ||||| | Sbjct 831398 GATCTTGGCCTTC-ACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCT 831456 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||| ||||| ||||| || |||||| Sbjct 831457 TGCCAGTCAGAGTCTTGACGAAGATTTGCATG 831488 >seq27 Length=46380 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||||| || || |||||||||||||| ||||| |||||| Sbjct 99 CCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 158 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || | |||||| || || || |||| ||| |||||||||| ||| Sbjct 159 AGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGA 218 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || |||| || | | | ||||| |||||||| Sbjct 219 ATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACATTGTCGATCGTGTCTGAAGACTCCAC 277 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||| || || || |||||||| |||||||| |||||| Sbjct 278 CTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATG 326 >seq59 Length=643831 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| |||||| Sbjct 401468 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401409 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || ||||| ||||||||||||||||||| ||| Sbjct 401408 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401349 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 401348 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401289 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || || || || ||||| ||||| | ||||| Sbjct 401288 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401242 Score = 107 bits (118), Expect = 2e-18 Identities = 114/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| ||||| ||||| || || || ||||||||||| | Sbjct 499053 CCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTG 499112 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || ||| |||| || |||||||| ||||| || ||||| |||||||| |||| ||| Sbjct 499113 AGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGA 499172 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 | | |||||||| | ||| | ||||||| Sbjct 499173 ATTCCCTCCTTGT-CTTGAATCTTTGCTT 499200 >seq60 Length=383220 Score = 120 bits (132), Expect = 3e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || |||||||||||||||||||| ||||| |||||| Sbjct 383030 GCCACCACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 383089 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||| || ||||| || || ||||||||||||| || Sbjct 383090 CAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGG 383149 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 || || |||||||||| ||| || Sbjct 383150 AATGCCCTCCTTGTCCTGGATCTT 383173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303647493200