Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq11 140 3e-28 >seq11 Length=163833 Score = 140 bits (154), Expect = 3e-28 Identities = 459/701 (65%), Gaps = 12/701 (2%) Strand=Plus/Minus Query 16697 TCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTA 16756 ||||||||||| | ||||||| || || || |||||||| || ||||| ||||| || Sbjct 12846 TCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGTC 12787 Query 16757 GC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTAT 16815 | || | | || | || || || || | | | | || || ||||| || || Sbjct 12786 GAGTGGTAGTGCTTCGG-GTTGCCGAGAGCGACCAGCAGACGGTCGGCCACAAACTCAAT 12728 Query 16816 ATATTGGCACATTA-ATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCA 16874 || |||||||| | | ||| ||||| || ||||| || || ||||| ||||||| Sbjct 12727 GTACTGGCACATGAGACGAGCA-TTCATGCCGATAAGCGACACAGGCAGAGCCTCCGTCA 12669 Query 16875 AAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC 16933 |||| || || ||| || || || || |||| || | || ||| | || Sbjct 12668 AAAAGTCCTT-CTCGATCGAGACAGCCTCGGTAATGATGCGGTTGAC-CGTGTCAGGGTG 12611 Query 16934 GGTGTATGT-TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTC 16992 | | | || || || | |||| || || || || ||| || | |||||||| Sbjct 12610 CGAGCGCTTCTTCAGGTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTC 12551 Query 16993 TCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCA 17052 | | | ||||| ||||| || || | || || ||||| || || ||||| | ||| Sbjct 12550 ACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCA 12491 Query 17053 AAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAA 17112 || |||| || ||||| || || ||||| || ||||| |||| |||||||| | | Sbjct 12490 GAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAG 12431 Query 17113 TCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTG 17172 || || | | ||| || |||| |||||| | |||||||||| || || Sbjct 12430 GCGCTCCGAGAACGAGGCACGCTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTG 12371 Query 17173 CTTTATGCAATCC--ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCG 17230 ||| | ||| || || || || || || || | | ||| | | |||| Sbjct 12370 CTTCA--CAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCG 12313 Query 17231 ATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATC 17290 || ||||| |||||||| || ||| | || ||||| ||||||||||| ||| Sbjct 12312 CGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATC 12253 Query 17291 TGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCT 17350 || || ||||| ||||| || || ||||| | || ||||| | ||| || ||| Sbjct 12252 TGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAAC 12193 Query 17351 AGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || || |||||||| || ||||| ||||||||| ||||| Sbjct 12192 AGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGC 12152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545011291880