Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq11 408 4e-109 seq68 132 5e-26 seq1 131 2e-25 seq53 122 9e-23 >seq11 Length=163833 Score = 408 bits (452), Expect = 4e-109 Identities = 600/839 (72%), Gaps = 15/839 (2%) Strand=Plus/Plus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 ||||| || ||| | ||||| || | |||| || || ||| |||||||| ||||| Sbjct 11987 CGCCGCTTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCT 12046 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719 ||||| ||||||||||||| |||||||| || ||||| |||||| | ||||||||| Sbjct 12047 GAGGCCTCGTTCTGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGAC 12106 Query 116720 ---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCC 116776 ||| |||||||||||||||| || || | | ||| || || || |||||||| Sbjct 12107 AACCGCATGAACGACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCG 12166 Query 116777 AGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCC 116836 ||||| || || |||||||| ||| | ||||||||| | || ||||||||||| Sbjct 12167 TCGGACGGTATTGTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGCG 12226 Query 116837 GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 ||||| || ||||||||||| || ||||| ||||||||| | |||||||| | || Sbjct 12227 GAGGCTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTAC 12286 Query 116897 TCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGA---AGCTCCGTTTGTTGAAC 116953 ||| ||||||||||||||| | ||| ||| | || || || |||| ||| Sbjct 12287 TCGCTGCTCATCGACACGTACATCCGCGACACGGCGCAGCGCGAGTACC---TGTTCAAC 12343 Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 || |||||||| || || || || |||||||||||||||| || |||||||| || Sbjct 12344 GCTATCGAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCG 12403 Query 117014 GGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072 | || || | ||| | ||| |||||||| ||||| || || ||||| |||||| |||| Sbjct 12404 GACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTT 12462 Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 ||| |||||| || || | || || ||||| ||||| || || |||||||| || || Sbjct 12463 CTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCT 12522 Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192 | | ||| |||||||| || || | |||||||||||||| ||||||||| || || Sbjct 12523 GTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTT 12582 Query 117193 GCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||||||| || || | |||| || | | | | || |||| ||| | |||| Sbjct 12583 GCTGTTCAGTCACCTGAAGAAGCGCTCGCACCCTGACACG-GTCAACCGCATCATTACCG 12641 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGAC 117311 | || ||| | |||||| || ||| | || || || ||||| ||| || | || Sbjct 12642 AGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCA 12701 Query 117312 TCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAG 117370 | || ||| | |||| || ||||| ||||| || |||||| | |||||| ||| Sbjct 12702 TGAA-TGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCT 12760 Query 117371 CTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | | | | ||||||||| || || | || || | ||||||||| | |||||| Sbjct 12761 CTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTC 12819 >seq68 Length=564861 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || ||||| || || | || |||||| || | Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||||| || || | ||||| |||||||| || ||||||| Sbjct 517884 GACACGATTGATAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCA 517826 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | ||| || || |||||||| || | ||||| || | ||||||||| Sbjct 517825 ACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAA 517766 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||||| || || Sbjct 517765 CATCCAGAAGGAGAGCACGCTGCACCTTGT 517736 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || |||||||| ||||| || |||||| | || || || | | Sbjct 518400 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518341 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| || || || || ||||||| Sbjct 518340 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 518281 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| | |||| || || || ||| |||| || | |||||| || | |||||||||| Sbjct 518280 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 518221 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| ||| || || || || Sbjct 518220 ATCCAGAAGGAGAGCACTCTTCACCTGGT 518192 >seq1 Length=1489072 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| || || || | Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| || || |||||||| |||| |||||||||| |||||||||| Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 830660 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| || || || ||| Sbjct 830659 ATCCAGAAGGAGAGCACTCTTCACCTGGTG 830630 >seq53 Length=642545 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || ||||| || || || |||||| | || || || | || Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401300 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| ||||| || | || || Sbjct 401301 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGG 401347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218613938160