Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq68 113 5e-20
seq1 113 5e-20
seq53 91.5 2e-13
>seq68
Length=564861
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| || | ||||||||||| ||||| ||||| ||| || ||| || | || ||
Sbjct 517963 CACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTC 518022
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
| ||||||||||||||| || || ||||| ||||||| || | | |||||||||
Sbjct 518023 CAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTG 518082
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||| || || | | | | |||||| || ||||| || | ||||| || ||
Sbjct 518083 GATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTT 518142
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| || |||||||||||
Sbjct 518143 GCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172
Score = 105 bits (116), Expect = 8e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040
|||| ||||||||||| || || ||||| || |||||| || | || || ||||||
Sbjct 517742 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGC 517801
Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100
||||||||||| || || ||||| ||||| | || | || |||||||||| ||| ||
Sbjct 517802 TTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTA 517861
Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160
|||| | | | |||||| ||||| || || | || || ||||| || ||
Sbjct 517862 GCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTA 517921
Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || || || |||||
Sbjct 517922 AGAGTCTTGACGAAAATCTGCAT 517944
Score = 89.7 bits (98), Expect = 6e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||||||||| || || ||||| || |||||| ||| | || || | ||||||||||
Sbjct 518204 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCA 518263
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106
|| || || | || || ||||| | || | | ||||||||| ||| || ||
Sbjct 518264 GCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTC 518323
Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166
| | | | |||||| || ||||| || | ||||| || ||||| || ||||||
Sbjct 518324 ACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTC 518383
Query 43167 TTTACAAAGATTTGCAT 43183
|| || || ||||||||
Sbjct 518384 TTAACGAAAATTTGCAT 518400
>seq1
Length=1489072
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
||||| || | ||||||||||| || || ||||| || || || || |||| ||
Sbjct 830630 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 830689
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||||||||||||||| ||||| ||||| ||||| | || | | ||||||||||
Sbjct 830690 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 830749
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||| || || | | | | |||||| || || || |||| |||||| || ||
Sbjct 830750 GATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTT 830809
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| || |||||||||||
Sbjct 830810 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839
>seq53
Length=642545
Score = 91.5 bits (100), Expect = 2e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||||| || | || |||||| || || ||||| || ||| || || |
Sbjct 401335 CGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 401276
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || ||||||||||||||||| || || ||||| ||||| | || | | |||||||
Sbjct 401275 TCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTG 401216
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
||| ||| || || | || | | ||||||| || ||||| || | |||||
Sbjct 401215 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATC 401156
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || || ||||| || || | ||||||
Sbjct 401155 GTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816949557480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |