Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq11 257 1e-63 seq68 120 3e-22 seq1 116 3e-21 seq53 102 7e-17 >seq11 Length=163833 Score = 257 bits (284), Expect = 1e-63 Identities = 583/866 (67%), Gaps = 27/866 (3%) Strand=Plus/Plus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 ||||| |||| ||||| || | || || ||| |||||||| ||||| || || Sbjct 11993 TTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCC 12052 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 ||||| ||||||| || || || || ||||| ||||| || ||| ||||| || | Sbjct 12053 TCGTTCTGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGACAACCGC 12112 Query 57660 A---AAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | || ||| | | ||| | | ||| | ||||| |||||||| || || Sbjct 12113 ATGAACGACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGAC 12172 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA-CAA-GAAGTGCAAGTGACGGAGG 57774 |||||||| |||||||| || | || | ||||| ||| |||||||| ||| |||||| Sbjct 12173 GGTATTGTGAACGAGAACCTGTTGGAGCG--TTTCAGCAACGAAGTGCAGGTGGCGGAGG 12230 Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834 | | ||||| ||||| || || | || || ||| | || || || | || |||| Sbjct 12231 CTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGC 12290 Query 57835 TACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAACGCGATC 57893 | |||||||| |||||| | |||| || || || || |||||||||| ||| Sbjct 12291 TGCTCATCGACACGTACATCCGCGACA-CGGCGCAGCGCGAGTACCTGTTCAACGCTATC 12349 Query 57894 GAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATA----AAAAG 57949 || || || |||| | ||||||| |||||| | | ||||| | ||| Sbjct 12350 GAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAG 12409 Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009 || ||| ||||| | ||| | || | ||||| |||||||| || || || ||||| Sbjct 12410 CGT----GCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTT 12465 Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069 |||||| |||||| | || || ||| ||||||| || || || ||||| || ||| | Sbjct 12466 CTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTC 12525 Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAAT 58129 ||| |||||| | || | || ||||||||||| || || || ||||||||| | | Sbjct 12526 GTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCT 12585 Query 58130 GTACTCTCACATTGTCAATAAACCGACGCGGGATCGCA---TCTTGGACATTATCACCGA 58186 || | |||| | || || | ||| | || || ||| || ||||| Sbjct 12586 GTTCAGTCAC---CTGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGA 12642 Query 58187 GGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTAT 58246 ||| ||| ||||||| || || ||| | || || || || || ||| | | |||| || Sbjct 12643 GGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCAT 12702 Query 58247 GAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT 58306 ||| | | | |||| |||||||||||||||| |||||| | || || ||| || Sbjct 12703 GAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCG--CT 12760 Query 58307 GATTGGAGAGCG--TCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCG 58364 | | || || ||| || ||| ||||| ||||| |||||| | |||||| Sbjct 12761 CTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCG 12820 Query 58365 CTCGAGGGCAAGACAAACTTTTTCGA 58390 || |||||||| | ||||||||||| Sbjct 12821 CTGCAGGGCAAGTCGAACTTTTTCGA 12846 >seq68 Length=564861 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || ||||| ||||||||| | || || || | || Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||||||| | || |||||||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || |||||||| || ||| |||| || || ||| Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || |||||||| |||| ||| | || | || |||| Sbjct 517992 ATTCAGAAGGAGAGCACTCTTCACTTGGTGCTTCGCCTTCGTGGTGGTA 517944 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || ||||| ||||||||| | || || || | || Sbjct 518401 CATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTC 518342 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || |||||||||||| | || || ||||| Sbjct 518341 AGACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 518282 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || | || || ||||| || |||||||| || ||| ||||||| || || Sbjct 518281 ACAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAA 518222 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || |||||||| ||||| || | ||| | || |||| Sbjct 518221 CATCCAGAAGGAGAGCACTCTTCACCTGGTTCTCCGTCTGCGCGGTGGTA 518172 >seq1 Length=1489072 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| |||||||| |||| ||||| | || Sbjct 830840 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTC 830781 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||| || | || || ||||| Sbjct 830780 GGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCA 830721 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| |||| ||| || | ||||| || || Sbjct 830720 ACAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAA 830661 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || || |||||||| ||||| ||| Sbjct 830660 CATCCAGAAGGAGAGCACTCTTCACCTGGTGCTT 830627 >seq53 Length=642545 Score = 102 bits (112), Expect = 7e-17 Identities = 166/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||| | ||||| ||||| || || || || ||||||||| | || || || | ||| Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || ||||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || || || ||||||| || ||| Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401300 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 || || || || ||||||||||| ||||| || | ||| | || ||| ||||||| Sbjct 401301 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGGTGCCAAGAAGCG 401359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765892940720