Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq11 114 2e-20
>seq11
Length=163833
Score = 114 bits (126), Expect = 2e-20
Identities = 387/598 (65%), Gaps = 10/598 (2%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| ||| || || || ||| ||||||||||||||| | |||| | ||||| ||
Sbjct 12588 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 12529
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|||| || || ||||| || |||||||| || ||||| || || || || || || ||
Sbjct 12528 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 12469
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750
|| |||||||| || || || || ||||| || | ||| | ||| | | ||| ||| |
Sbjct 12468 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 12410
Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808
|||| ||||| | ||||| |||||||||| || ||| || || || ||
Sbjct 12409 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 12350
Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868
|| || || || || || | | | || | || || ||||| | ||
Sbjct 12349 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 12290
Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928
|| | ||||| |||||||| || || ||||| || |||||||| || | |||
Sbjct 12289 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 12230
Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988
||| | | ||||||||| | | || || || | || || ||||| || || ||
Sbjct 12229 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 12170
Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----A 34044
|| || || ||||| | || | | ||| | |||| || |||
Sbjct 12169 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGT-TGTCGTTCATGC 12111
Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104
| || | ||| || | | || || || | ||| || || || | ||||| || || |
Sbjct 12110 GGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGG 12051
Query 34105 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|||| ||||| || ||||| |||||| || || || |||| ||||| | |||||
Sbjct 12050 CCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 11993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816883582480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |