Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq11 147 3e-30 >seq11 Length=163833 Score = 147 bits (162), Expect = 3e-30 Identities = 394/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || || || ||| ||||||||||||||| | |||| || ||||| || Sbjct 12588 AACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAG 12529 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 |||| || || ||||| || |||||||| || ||||| || || |||||||| || || Sbjct 12528 AACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCC 12469 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCGC- 50128 || |||||||| || || || |||||||| || ||||| | ||| | | ||| ||| | Sbjct 12468 GAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTC-CGAGAACGAGGCACG 12410 Query 50129 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 |||| ||||| | ||||| |||||||||| || ||| || || || || Sbjct 12409 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 12350 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 || || || || || || | | | || | || || ||||| | || Sbjct 12349 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 12290 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 || | ||||| |||||||| || || ||||| || |||||||| || | ||| Sbjct 12289 CGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGC 12230 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 ||| | | ||||||||| | | || || || | || || ||||| || ||||| Sbjct 12229 CTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTC 12170 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAG 50423 || || || ||||| | || | | ||| || |||||| || | | Sbjct 12169 CGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCG 12110 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || | ||| || | | || || || | ||| || || || | ||||| || || || Sbjct 12109 GTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGC 12050 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||| ||||| || ||||| |||||| || || || |||| ||||| | ||||| Sbjct 12049 CTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 11993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267982969240