Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 5e-13 >seq11 Length=163833 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 50644 ATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGAC 50703 ||||| || || ||||| ||||| ||| | || ||| | | | |||||||| || Sbjct 12653 ATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTCGT 12712 Query 50704 ATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAACCG 50763 | |||||| |||||||||||||||| || ||| | || || | || || | ||| Sbjct 12713 CTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCG 12772 Query 50764 AAATACTA-TAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAA 50822 || |||| | | ||| || || ||| |||||| | ||||| ||| || ||||||| Sbjct 12773 AAGCACTACCACTCGACG-AATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAA 12831 Query 50823 AACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855 | ||||||||||| | ||||| | ||| || Sbjct 12832 GTCGAACTTTTTCGAGCGTCGTGTGGCCGACTA 12864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013823271120