Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq11 237 2e-57 >seq11 Length=163833 Score = 237 bits (262), Expect = 2e-57 Identities = 577/866 (67%), Gaps = 25/866 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| | || || || || |||| |||||||| |||||| ||||||| || Sbjct 11999 CTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTC 12058 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 ||||| | || |||||||||||||| |||||| || |||| ||||| | || ||| Sbjct 12059 TGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGACAACCGCATGAAC 12118 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || | ||||| | ||| | | | | || ||||| |||| || || || || Sbjct 12119 GACAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATT 12178 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TG 125233 || ||||| || |||||| || ||| | || || | | |||| ||| || Sbjct 12179 GTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGCGGAGGC-TCGCTG 12237 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||| ||||| ||||| || ||||| |||||| | |||||||| | ||||| || || Sbjct 12238 CTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGCTGCTCAT 12297 Query 125294 TGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGACAC 125350 |||| |||||| ||||| || || || | || || || ||||| ||||| || Sbjct 12298 CGACACGTACATCCGCGACACGGCGCAGCGCGAGTACCTGTTC---AACGCTATCGAGAC 12354 Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || | | | ||||| | |||| |||| ||||| || |||||| Sbjct 12355 CATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGAT---TGCGGACAAGCG 12411 Query 125411 T---TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | |||| | | || | || ||||| || |||||||| |||||||||||||| ||||| Sbjct 12412 TGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGG 12471 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 |||||| | ||||| ||||| |||||||| || |||||||| || ||| || | Sbjct 12472 CTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTC 12531 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 |||||| |||| | || |||||||| || ||| |||||||| | ||||| Sbjct 12532 GAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTT--- 12588 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 || | ||| || | || | ||| | ||||| | ||| | ||||| Sbjct 12589 CAGTCACCTG------AAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGA 12642 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || || ||| || | || ||| | || || | || || || | || ||||| Sbjct 12643 GGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCAT 12702 Query 125708 GAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766 ||| ||| | || |||||| ||||||| ||||||||||| || ||||| ||| || Sbjct 12703 GAA-TGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTC 12761 Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCAC 125826 | || ||| ||| || | | |||||| ||||| || ||| | ||| || | Sbjct 12762 TCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGC 12821 Query 125827 TAGAGGGTAAGACCAACTTTTTCGAG 125852 | |||| ||| | |||||||||||| Sbjct 12822 TGCAGGGCAAGTCGAACTTTTTCGAG 12847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058357045160