Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq68 105 2e-17 seq53 98.7 2e-15 >seq68 Length=564861 Score = 105 bits (116), Expect = 2e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| ||||| | || || || || || || ||||| ||| Sbjct 517754 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 517813 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || || || || || || || ||||| ||||| || || || || Sbjct 517814 ATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTA 517873 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | ||| ||| || || | ||||||||| ||||||||||| || || || Sbjct 517874 TCAATCGTGTC-CGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGAC 517932 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 517933 GAAAATCTGCAT 517944 >seq53 Length=642545 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 |||||| || || ||||||||| || || | ||||| ||||| || ||||| ||||| Sbjct 498969 TTCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAA 499028 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 || || | ||||||||| ||||| ||||| || || || |||||||||||||| || Sbjct 499029 GATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397057541428