Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq68 95.1 1e-14 seq1 86.0 5e-12 >seq68 Length=564861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| ||||||||||| ||||||||||| ||| ||| || | ||||| Sbjct 517963 CACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTC 518022 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || ||||||||| || |||| | |||||| || || || | || |||||||||| Sbjct 518023 CAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTG 518082 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | || || || | ||||||| ||| | || || || || Sbjct 518083 GATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTT 518142 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || || || || ||||| Sbjct 518143 GCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || | ||||||||||| Sbjct 517742 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGC-CATCCTCCAGCTG 517800 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || |||| | |||||| || ||| || | | ||||||||| || || Sbjct 517801 CTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTT 517860 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | || || || | || || || | ||| || |||||||| || Sbjct 517861 AGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGT 517920 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || ||||||||||| Sbjct 517921 AAGAGTCTTGACGAAAATCTGCAT 517944 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| ||||||||||| || |||||||| || || | || ||| | ||||||| ||| Sbjct 518198 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTG-CGCCCATCCTCCAACTG 518256 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || || || || || ||| || | || |||||||||| || || Sbjct 518257 CTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 518316 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || || | ||||||| ||| | || || || || || || Sbjct 518317 AGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGT 518376 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || ||||| ||||| Sbjct 518377 GAGCGTCTTAACGAAAATTTGCAT 518400 >seq1 Length=1489072 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| ||||||||||| || |||||||| || || | || || ||||||||||||| Sbjct 830637 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTGAGGGTGCGGCCGTCCTCCAGCTG 830695 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || |||| | |||||| || ||| || | || ||||||||| || || Sbjct 830696 CTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 830755 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || || || | ||||| ||||| || || || || || || Sbjct 830756 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGT 830815 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || || ||||| Sbjct 830816 CAGAGTCTTGACGAAGATTTGCAT 830839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250732806091