Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq68 95.1 1e-14
seq1 86.0 5e-12
>seq68
Length=564861
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || ||||| ||||||||||| ||||||||||| ||| ||| || | |||||
Sbjct 517963 CACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTC 518022
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| ||||||||| || |||| | |||||| || || || | || ||||||||||
Sbjct 518023 CAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTG 518082
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || ||| | | | || || || | ||||||| ||| | || || || ||
Sbjct 518083 GATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTT 518142
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || || || || |||||
Sbjct 518143 GCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | |||||||||||
Sbjct 517742 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGC-CATCCTCCAGCTG 517800
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| || |||| | |||||| || ||| || | | ||||||||| || ||
Sbjct 517801 CTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTT 517860
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||||| | || || || | || || || | ||| || |||||||| ||
Sbjct 517861 AGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGT 517920
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || |||||||||||
Sbjct 517921 AAGAGTCTTGACGAAAATCTGCAT 517944
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
||||| ||||||||||| || |||||||| || || | || ||| | ||||||| |||
Sbjct 518198 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTG-CGCCCATCCTCCAACTG 518256
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| | | || || || || || ||| || | || |||||||||| || ||
Sbjct 518257 CTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 518316
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | || || || | ||||||| ||| | || || || || || ||
Sbjct 518317 AGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGT 518376
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||| || || || ||||| |||||
Sbjct 518377 GAGCGTCTTAACGAAAATTTGCAT 518400
>seq1
Length=1489072
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||| ||||||||||| || |||||||| || || | || || |||||||||||||
Sbjct 830637 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTGAGGGTGCGGCCGTCCTCCAGCTG 830695
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| || |||| | |||||| || ||| || | || ||||||||| || ||
Sbjct 830696 CTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 830755
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||| | | | || || || | ||||| ||||| || || || || || ||
Sbjct 830756 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGT 830815
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || |||||
Sbjct 830816 CAGAGTCTTGACGAAGATTTGCAT 830839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250732806091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |