Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 100 7e-16 seq40 86.0 2e-11 >seq11 Length=163833 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 22480 TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 || ||| |||| || ||| | || ||||| | || || ||||| ||||| || || | Sbjct 12416 TCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCG 12475 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 ||| | ||||| ||||| || || |||| | ||||||||||| |||| || || Sbjct 12476 TTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAAC 12535 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 ||| | |||| ||| || |||||||| || ||||| |||||||| |||| Sbjct 12536 GAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCT 12585 >seq40 Length=1303022 Score = 86.0 bits (94), Expect = 2e-11 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 65914 GCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACG 65973 ||||| || |||| ||| || ||||||||| | | || || || || || ||||| | Sbjct 1284709 GCCTTGACGAGACGACGTTGAATGTAACCAGTCTCGGCCGTCTTCACAGCTGTATCGATC 1284650 Query 65974 AGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGT-AGACCAAGCAT 66032 ||||||||||| |||| ||| ||| ||||||||||| || || ||| |||||| ||| Sbjct 1284649 AGACCTTCACGACCGGCCATGGCATGGAAGAAAAACTC-GTGGGCTGTGAGACCACGCAA 1284591 Query 66033 AAACGAATT 66041 | |||| || Sbjct 1284590 ATACGAGTT 1284582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352080371162