Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq68 116 3e-21 seq53 98.7 9e-16 seq1 95.1 1e-14 >seq68 Length=564861 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || || | ||||| | || |||||||| || Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| ||||| ||||| || |||||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| ||||||| || || || || || || |||| || ||| || | || ||||| Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || ||| || || || ||||| Sbjct 517992 ATTCAGAAGGAGAGCACTCTTCACTTGGTGCT 517961 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || |||||| | || ||| | ||||| || || || Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || | ||| || ||| ||||| || || |||||||| ||||| Sbjct 517884 GACACGATTGA-TAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCA 517826 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| ||||||| || || || || | || |||| |||||| || |||| ||||| Sbjct 517825 ACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAA 517766 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || |||||| || Sbjct 517765 CATCCAGAAGGAGAGCACGCTGCA 517742 >seq53 Length=642545 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| | ||||| || | ||||| | || |||||||| || Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| ||||| || |||| ||||| Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401300 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 401301 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCT 401332 >seq1 Length=1489072 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| |||| || ||||| || Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || ||||| || |||||| Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || || | || || | ||||| | |||| ||||| Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 830660 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 830659 ATCCAGAAGGAGAGCACTCTTCACCTGGTGCT 830628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327519412165