Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq11 165 9e-36 >seq11 Length=163833 Score = 165 bits (182), Expect = 9e-36 Identities = 402/603 (67%), Gaps = 7/603 (1%) Strand=Plus/Minus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 || ||| ||||||||||||||||| || | ||| ||||| || | || | ||| || Sbjct 12590 TGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCG 12531 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 ||| | | ||| || | || || || ||||| ||||| || || || ||||| | Sbjct 12530 AGAACGACAGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGC 12471 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 | || || || || || |||||||| ||||| ||||||| || || | || || Sbjct 12470 CCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGAGGCAC 12411 Query 93261 AATTA-CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 || | || ||||| | ||||| ||||| || | ||| | | || | || Sbjct 12410 GCTTGTCCGCA-ATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTC 12352 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 ||||||||||| || ||||| || |||| ||| || || ||||| || ||||| | | Sbjct 12351 TCGATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGC 12292 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || || || | || || || | |||||||| ||| ||||| |||||||| || | | Sbjct 12291 AGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGA 12232 Query 93440 GCTTCCGTGATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || |||| | ||||||||| ||| ||| | ||| | || || || || || ||||| Sbjct 12231 GCCTCCGCCACCTGCACTTCGTTGCTGAAA-CGCTCCAACAGGTTCTCGTTCACAATACC 12173 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA- 93557 || || || || || || || | | | | ||| || ||| | || || | Sbjct 12172 GTCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCAT 12113 Query 93558 --GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | || ||||| ||| | || || || |||||||| || || | ||||| ||||| Sbjct 12112 GCGGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGA 12053 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 || || || || |||||||| |||| || || || || | || || || | ||||| Sbjct 12052 GGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 11993 Query 93676 ACG 93678 || Sbjct 11992 GCG 11990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860166570840