Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq68 102 7e-17 seq1 102 7e-17 seq53 100 2e-16 >seq68 Length=564861 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || |||||||| | || | ||||| ||| || | Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || ||||||||||| |||||||| || ||| Sbjct 517884 GACACGATTGATAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAA 517825 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | |||||| |||||| | ||| |||||| Sbjct 517824 CAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAAC 517765 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 517764 ATCCAGAAGGA 517754 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| |||| || || ||||| | | Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||| |||||||| ||||| ||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||||| |||||| ||| || | || |||||| Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 517992 ATTCAGAAGGA 517982 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||| || | || || || ||| |||| || || ||||| | | Sbjct 518400 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518341 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||| |||||||| || || ||| Sbjct 518340 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 518281 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || ||||| || || ||||| |||||| ||||| | ||| |||||| Sbjct 518280 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 518221 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||| | || | ||| | || ||||||| ||| Sbjct 518220 ATCCAGAAGGAGAGCACTCTTCACCTGGTTCTCCGTCTGCGCGGTGGT 518173 >seq1 Length=1489072 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || || ||| |||| || || || || || | Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||||||||| || || ||| Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||||| || ||| |||||| Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 830660 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 830659 ATCCAGAAGGA 830649 >seq53 Length=642545 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || | ||||| || ||| |||| ||||| ||||| | || Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||||||||| || || ||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | |||||| ||||||| | ||| |||||| Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401300 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || | || |||| |||| || ||| Sbjct 401301 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGGT 401348 Score = 98.7 bits (108), Expect = 8e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 ||||| ||| ||||||||||||||||| ||||| || |||||||| ||||| || |||| Sbjct 499084 TCAAAGCAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATCTTTG 499025 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 |||| || ||| ||||||| || || || || || ||||| ||||||||| || Sbjct 499024 CCGGAAAGCAGCTAGAGGACGGGCGTACACTCAGTGACTATAACATCCAAAAAGAAAGCA 498965 Query 22415 CC 22416 || Sbjct 498964 CC 498963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727534495415